KEGG   Thermococcus litoralis: OCC_04355
Entry
OCC_04355         CDS       T02800                                 
Name
(GenBank) DNA-directed RNA polymerase subunit M
  KO
K03057  transcription factor S
Organism
tlt  Thermococcus litoralis
Brite
KEGG Orthology (KO) [BR:tlt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tlt03021]
    OCC_04355
Transcription machinery [BR:tlt03021]
 Prokaryotic type
  Archaeal type
   Basal transcription factors
    TFS
     OCC_04355
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Cas12f1-like_TNB Zn_Ribbon_YjdM Zn_Ribbon_TF Zn_Ribbon_1 Zn_ribbon_IS1595 Baculo_LEF5_C Zn_ribbon_PaaD DUF7568 A2L_zn_ribbon Zn_ribbon_3 DZR Rpr2 Ribosomal_aS21 DmmA-like_C IBR Auto_anti-p27 EDR4-like_1st DUF3797 RadD_Zn_ribbon Zn_ribbon_4 Zn_ribbon_LapB EcdD_BsdD_detox DUF7836 DUF7351 DUF6758 GpA_ATPase IBR_1 HypA DUF6980 TackOD1 C1_1 VVA0879 CapR RYYR-CCHC Zn_ribbon_PriA
Other DBs
NCBI-ProteinID: EHR78059
UniProt: H3ZPL5
LinkDB
Position
complement(299451..299777)
AA seq 108 aa
MKFCPKCGSIMLPDKKKGVFVCRKCGYEEPLDPETANRYKITQKVKHEREDIPVIEQDIA
TLPKVKITCPKCGNDEAYWWEMQTRAGDEPSTIFYRCTKCGYTWRSYE
NT seq 327 nt   +upstreamnt  +downstreamnt
atgaaattctgtccaaaatgtgggagcataatgctgccagataagaagaagggagtcttt
gtgtgcaggaaatgtggatatgaggaacctcttgatccagagacggcaaacagatacaaa
ataacccaaaaggtcaagcacgagagagaagacatccccgttattgagcaggacatagct
acacttccaaaagtaaagataacctgtccaaagtgtggcaacgatgaggcctactggtgg
gaaatgcagacaagggctggagatgagccttcaacgatcttctaccgctgtacaaagtgt
ggctacacatggagaagctatgaatag

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