KEGG   Thermococcus litoralis: OCC_04365
Entry
OCC_04365         CDS       T02800                                 
Name
(GenBank) DNA polymerase
  KO
K04802  proliferating cell nuclear antigen
Organism
tlt  Thermococcus litoralis
Pathway
tlt03030  DNA replication
tlt03410  Base excision repair
tlt03420  Nucleotide excision repair
tlt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tlt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OCC_04365
   03410 Base excision repair
    OCC_04365
   03420 Nucleotide excision repair
    OCC_04365
   03430 Mismatch repair
    OCC_04365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tlt03032]
    OCC_04365
   03400 DNA repair and recombination proteins [BR:tlt03400]
    OCC_04365
DNA replication proteins [BR:tlt03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    OCC_04365
DNA repair and recombination proteins [BR:tlt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     OCC_04365
   MMR (mismatch excision repair)
    Other MMR factors
     OCC_04365
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    OCC_04365
SSDB
Motif
Pfam: PCNA_N Rad1 PCNA_C
Other DBs
NCBI-ProteinID: EHR78061
UniProt: H3ZPL7
LinkDB
Position
complement(298517..299266)
AA seq 249 aa
MPFEIVFDGAKDFASLIDTASNLIDEAAFKVTEEGISMRAMDPSRVVLIDLNLPAGIFSK
YDVEGEETIGVNMDHFKKILKRGKSKDILVLRKGEENFLEVTLEGTAKRTFRLPLIEVEE
LELELPELPFTVKAVVLGEVLKEAVKDASLVSDSIKFIAKENEFIMRAEGETQEVEIRLT
LEDEGLLDLEVEEETRSAYGVSYLADMVKGIGKADEVVLRFGNEMPLQMDYPIRDEGRLT
FLLAPRVEE
NT seq 750 nt   +upstreamnt  +downstreamnt
atgccgttcgagatagtttttgatggggcaaaggattttgcaagcttgattgacacggca
agtaatttaatcgatgaggcggccttcaaggttacagaggaaggcatatcaatgagggcc
atggatccaagcagggttgttttgattgacctcaacctccccgccgggatcttcagcaaa
tatgacgttgaaggagaagaaaccatcggcgttaacatggatcacttcaagaaaatcctc
aagagaggaaagagcaaagacatccttgtccttaggaagggagaagaaaacttccttgag
gtaacccttgagggaactgcaaaaaggacattcagacttcccctcattgaagttgaggag
cttgagcttgagctccccgaattacctttcactgtaaaagcagtcgttctcggtgaggtt
cttaaggaggcagttaaagatgcctcccttgttagtgactccataaagtttattgccaaa
gagaatgagttcattatgagggcagaaggggagactcaagaggtcgagataaggctcacg
cttgaagacgaaggcttactcgaccttgaagttgaagaagaaactaggagcgcctatggt
gtcagctacctcgcggatatggtgaaaggaatcggaaaagctgacgaagtcgttctcaga
ttcggaaacgaaatgcccctccagatggactatccaattagggacgagggaaggcttacg
ttcttgcttgctccgagagttgaggagtga

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