Thermococcus litoralis: OCC_06826
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Entry
OCC_06826 CDS
T02800
Name
(GenBank) double-stranded DNA repair protein Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tlt
Thermococcus litoralis
Brite
KEGG Orthology (KO) [BR:
tlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlt03400
]
OCC_06826
DNA repair and recombination proteins [BR:
tlt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OCC_06826
Archaeal homologous recombinant proteins
OCC_06826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_13
AAA_15
AAA_21
AAA_29
SMC_N
ABC_tran
EzrA
NPV_P10
Spectrin_Anc-1
Baculo_PEP_C
Spectrin
ERM_helical
ATG17_like
TACC_C
SbcC_Walker_B
Laminin_II
Seryl_tRNA_N
DUF1664
DUF3053
FtsK_SpoIIIE
GAS
AAA_27
HMBD
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
EHR78980
UniProt:
H3ZM36
LinkDB
All DBs
Position
799771..802425
Genome browser
AA seq
884 aa
AA seq
DB search
MMIEKIIVRDFRSHEFTKVTFAPGINLIIGQNGSGKSSLLDAILVGLYWPMKPKDLKKED
ILRVNGKSTEITIFFEKDNVKYQLHRNITKGIAFVKYQEGQGWHYATEASQQSVRRWMEK
MIPYDVFVNAIYIRQGEIDAILESDESREKVVRKVLGLDKYENAYNNLLEVRKTIDSKIS
AIEEYLTAMKNIDEMIEETRKSLSEAIKQINELTPKIPKLRAEAERIEKRLSELDELLEQ
LNKAKEEKNEIEKDLEGVKTRISSLIKSTNERKEKINELKKKFEKLEKIKPQAERYMELE
KFQREYSEIKSRIEKELKGYEGKLSQIEERVKELVQKEEELKELEEKIEEIAERLETLKQ
HAEQYEDAMRIKKTVEDLRKRLSLSEEKIKALKDEIEEAKRRREEIRERLEKIGEEKGKL
RSLSGEKDKAISELMKAKGRCPVCGAELTDEHREELIKSYKIEIKKYMERMKELEKEEKE
LRAELLGIEKTLKKESTVIATEEILKQIKENEEKLAQFNLRELEKDAKEYEKLSKEKNQL
EGKLKSILEELKKKPVLEKTKRNIREKIENAKKELQKYDKKLKELGFENEEDLGAELEKL
RPLYEEYLGLLKVKDELEKEEKRLGKEEEELKDLEKQRKRLEEQLSMLKERITELEKKYN
KEEHERLRKEYIQAREALTKAETELENLEKRKEELSKNLENLQKERDNVKSKKKELEELR
KAKERVQELREKVRRFKNLLKEDALAKVGEYASEIFEELTEEKYSGISVKAKENKVVLGV
IYDGKERELSFLSGGERIALGLAFRLALSLYLAGEIPLLIMDEPTPYLDEERRRRLVDIM
ERYLRKIPQVIIVSHDEELKDAADRVVRVRLENGVSRVEEVEVG
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgatgattgaaaagataattgtgagggatttccgctcacacgagttcacaaaggtaacg
tttgcacccgggataaatcttataatagggcaaaacggctccggaaaaagctcccttctc
gatgcgatacttgtaggcctttattggcccatgaagcccaaggatcttaaaaaggaggat
atcctcagggtaaatgggaaaagcactgagataacgatattttttgagaaagacaatgtg
aaataccagctccacaggaacataaccaagggcatagcttttgttaagtatcaagaaggt
cagggatggcactatgcaactgaagcaagccagcagtccgtgaggagatggatggaaaaa
atgattccctacgatgtatttgtgaacgcgatatacataagacagggagaaattgacgcg
atcttggagagcgatgaaagcagagaaaaggtcgttagaaaggttttaggtctggataaa
tatgaaaacgcctataacaaccttcttgaagttagaaaaaccatagactcgaaaatcagc
gcaattgaagaatacctcacagcaatgaagaacatagacgagatgatagaagaaactcga
aaaagcctaagcgaagctataaagcaaataaacgagcttacaccaaagattccaaagctg
agggcggaagctgaaagaatagaaaagaggctttctgaacttgacgagctgttggaacag
cttaacaaagcgaaagaagaaaagaatgaaattgaaaaggatctcgaaggagtaaagaca
aggataagctccttaatcaagtcaacaaatgaaaggaaagagaagataaatgaactgaaa
aagaaatttgaaaagcttgaaaaaatcaagcctcaagctgagagatacatggaactcgaa
aagttccagcgggaatacagtgaaataaaatcaaggatcgaaaaagagcttaaaggctac
gaaggaaagctttcccaaatagaagaaagagtcaaagagctagtgcagaaggaagaagag
ctaaaagagctagaagaaaaaatagaagaaatagcagaaaggcttgaaactctaaagcaa
catgcagagcagtatgaagatgccatgagaatcaagaaaacagtggaggatttaaggaag
agattatctctcagcgaagagaaaattaaagccctcaaagacgaaatagaagaggcaaaa
aggagaagagaggaaatccgcgagagacttgagaaaattggagaagaaaaaggaaagctc
aggagcctctccggagagaaagacaaggcaatatcagagctcatgaaggctaaaggaagg
tgtcccgtttgcggtgccgagcttacagacgaacacagagaagaactcattaaaagctac
aaaatagagattaaaaaatacatggaaaggatgaaagagctagaaaaagaggagaaggaa
cttagggcagagctcctgggaattgaaaagactttgaaaaaggaaagcactgtaatagca
accgaagagatattgaaacaaataaaagaaaatgaggaaaaactagcgcagtttaaccta
agagaactagaaaaagatgccaaagaatacgaaaagctctcgaaagagaagaaccagctt
gagggcaaacttaagagcatcttagaagaactcaaaaagaagccagtgctagaaaaaacg
aagagaaacataagagagaaaatagaaaacgctaaaaaggagcttcagaaatacgataag
aaactcaaagaactcggctttgaaaacgaagaagacctcggggcagagctcgaaaagttg
agacccctctatgaagaatacctaggccttttaaaggtcaaagatgagcttgagaaagag
gaaaaacgcctcggcaaagaggaagaagagctaaaagatttggaaaagcaaaggaaaagg
ctcgaagagcagctatctatgttaaaggagagaattacagaactcgagaaaaagtacaac
aaagaagagcacgaaaggcttagaaaagaatacatccaggctagagaagccctaacgaag
gcagaaaccgagcttgaaaacctcgaaaaaagaaaagaagagttgagcaaaaacctagag
aacctacagaaagaaagggataacgtcaagagcaagaaaaaagaactggaagagctgagg
aaagctaaggaaagagttcaagaactcagagaaaaggttagaaggtttaagaacctcctc
aaggaggatgcccttgcaaaagttggtgaatatgcaagtgaaatattcgaagagctcact
gaggagaaatactccggaataagtgtgaaggcaaaggaaaacaaggttgttcttggggtt
atatacgatggaaaggagagggagctctcattcttgagcggcggtgagagaatagccctc
ggtctggcgtttagattagccttatccctctaccttgcgggagagattcccctcctcata
atggacgagccgacaccttatctcgacgaggagaggagaagaagactcgtggacatcatg
gagcgctatctgagaaaaatcccgcaggtaataatagtttcgcacgacgaggagctcaag
gatgccgcagatagagtggtgagagtcaggcttgaaaacggcgtttcgagagtagaagaa
gtagaggtgggatga
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