Thermococcus litoralis: OCC_06836
Help
Entry
OCC_06836 CDS
T02800
Name
(GenBank) bipolar DNA helicase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
tlt
Thermococcus litoralis
Brite
KEGG Orthology (KO) [BR:
tlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlt03400
]
OCC_06836
DNA repair and recombination proteins [BR:
tlt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
OCC_06836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF87
HAS-barrel
HerA_C
TrwB_AAD_bind
YfeC-like
RsgI_N
ORC3_N
Prominin
Motif
Other DBs
NCBI-ProteinID:
EHR78982
UniProt:
H3ZM38
LinkDB
All DBs
Position
796722..798455
Genome browser
AA seq
577 aa
AA seq
DB search
MRIAEDAVGIVKGEASVIGYDFSAHPDVNLQFGEFVVAQNRNGEWVIGTIRRLQNINWLL
ISGKSTYQSLQLDLEQYGESIEDNEEVIASVRVLGKLSFNGENVEVLPNRVPIPNGRTVY
RLSDEVLKAIYNPGEGYIEVGTLLLRESVPIYLNADELVSRHFAVLAVTGAGKSNTVAVM
ISQIVEKLRGTVVVLDPHGDYVKLKLPNTGKKYVKIIEAKIRPEEMDSEELADLIEVAKN
ATIQREFLAKAWETIKYENPNLGGRELIEKLMETINDWIRNKEAKYWDEGKKDYFTEELK
SDRVETLRGVVLRLRRFLRNYGGLLTSEDLISQIEPGKANVIDLGPLDEGQMKVVVGKLL
QGIFEARVDYEKARKTLERIEEDLRESRAAKTSKLEEEIEELKKLMKSIERKSKALAEPI
LMVVEEAHIFAPQGEHNDAVRVLSRIAREGRKFGVGLGIVSQRPNKLNEDVLSQTNTKII
LKIVNPKDQDYVLKASEQLSNDLLADIASLGKGEAVIVGQAIALPALVKIYNFKERGGDY
GGEDIGIVSRWRKRAEEEKREEEIQQAYEDEGIEYDL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaggatagcggaagatgccgtcgggatagtcaaaggtgaggcaagtgtcatagggtat
gatttttccgctcaccccgatgtgaatttacagtttggggagtttgtcgttgcccagaac
agaaacggggaatgggttattggtacaatcagaagacttcaaaacataaattggcttctc
ataagtggaaaaagcacgtatcagtcccttcagcttgatttagagcaatacggagagagc
attgaggacaacgaggaagtaatcgcaagtgtaagggttctaggcaagctcagctttaac
ggcgagaatgttgaagttctaccaaatagagtcccaattcctaatggaaggactgtttac
aggttaagcgatgaggttctcaaggcaatatacaaccccggagaggggtacatagaggtt
gggacacttcttctaagagagagcgtgccaatttatttaaacgctgacgaacttgtatcg
agacattttgccgttttggcagttaccggagcaggcaagtcaaacaccgttgcagtaatg
ataagccaaatcgtcgaaaagctcaggggaacggtggtcgtcctagacccccatggagac
tacgtaaagctaaagctccccaacacagggaaaaagtatgtcaaaataatagaggccaaa
ataagacctgaggaaatggatagcgaggagctggcagacctaatagaggtcgcaaaaaat
gccaccatacagagagagtttctagctaaagcttgggaaacgatcaaatacgaaaaccca
aatttgggcggaagagagctcattgaaaagctcatggagacaataaacgactggatcaga
aataaagaagcgaagtactgggatgaagggaagaaggactatttcacggaggaactcaaa
tcggatagagtggagacactaaggggagttgttttaagacttaggagatttttgaggaat
tatggaggcttattaactagtgaggacttaatatctcaaattgaaccgggaaaggcgaat
gttatcgacctcggacccttagatgagggtcaaatgaaagtcgttgtcggaaaactgctc
cagggaatatttgaggcaagggtagactatgaaaaagccagaaagactcttgaacgcata
gaagaagatctaagagaaagcagagcggcgaaaacatcaaaacttgaagaagaaatcgaa
gagctcaagaaacttatgaagagcatcgaaaggaaaagtaaagcacttgccgagccaata
ctcatggtagtggaggaggcacatatatttgccccgcaaggggaacacaatgatgccgtg
agggttttgagcagaattgctagggaaggaagaaagtttggagttgggcttggaatagtg
tcccaaagaccaaacaaacttaatgaagacgtcttaagccagacaaacaccaagataatc
ttaaagatcgtaaatccgaaagaccaggactacgttctaaaggcaagtgaacagttgagc
aatgatttactagccgatatagcatctcttggaaaaggagaggcagttatagttggccaa
gcaatagcccttccagcgctggttaagatttacaacttcaaagaaaggggcggtgattat
ggaggagaggacatagggattgtatcaaggtggcgtaaaagagcagaagaagagaagaga
gaggaagaaattcagcaggcttatgaggatgaggggatagaatatgacctttaa
DBGET
integrated database retrieval system
