KEGG   Thermococcus litoralis: OCC_06871
Entry
OCC_06871         CDS       T02800                                 
Name
(GenBank) replication protein C
  KO
K04800  replication factor C large subunit
Organism
tlt  Thermococcus litoralis
Pathway
tlt03030  DNA replication
Brite
KEGG Orthology (KO) [BR:tlt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OCC_06871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tlt03032]
    OCC_06871
DNA replication proteins [BR:tlt03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     OCC_06871
SSDB
Motif
Pfam: AAA Rad17 AAA_14 RCF1-5-like_lid AAA_22 RuvB_N nSTAND3 AAA_5 AAA_16 ResIII DUF815 PPV_E1_C Zeta_toxin AAA_33 AAA_30 AAA_17 AAA_assoc_2 AAA_24 NPHP3_N AAA_19 AAA_28 AAA_11 TsaE T2SSE AAA_18 AAA_25 AAA_7 SRP54 NAC ABC_tran DNAX_ATPase_lid Gp44_lid Viral_helicase1 DUF553 AAA_29 AAA_6 UBA_Rad5
Other DBs
NCBI-ProteinID: EHR78989
UniProt: H3ZM45
LinkDB
Position
complement(784700..786160)
AA seq 486 aa
MLPWVEKYRPRRLVEIVNQEKALEKVKAWIESWFHGTPKKKALLLAGPPGSGKTTTVYAL
ANEYKFEVIELNASDDRTFGKIERYLNAAYTMDVFGRRRKLIFLDEADNIEPSGAREIAK
LIDKARNPIIMSANRYWEVPLEIRNKAEIVEYKRLSQRDILKALFRIVKAEGIFVPKEVL
QEIAKRARGDLRAAINDLQNIVSGGVEDAELVLAYRDVEKSIFEALGMIFATDNAKRAKM
ALMNLDNTPDEVLLWIEENIPYVYYKPEDIARAYEAISRADIYLGRATRTGNYGLWKYAV
DMMTAGVAVSGVKKKGFLRFYPPKTLKMLRDTKEERSIRDSIVKKIMKEMHMSKLEAIET
MQIFKAMFINNPDVAAHIAVFLDLGDKEIEFLTEDKEKAAKIKGKMLAIHRKLKETKTEL
EVRIETIEAEAIDEEEISKEEPEEEEVEEAEEVEEEIREEKEAEEKPEEKKEKKGKQATL
FDFLKK
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgctgccatgggttgaaaagtataggccaagaaggctcgtggagatagtaaatcaagag
aaagcgttggagaaggttaaagcatggattgaaagctggtttcatggaactcccaagaaa
aaagctctcctccttgccggtccccctggtagcgggaaaactacgacagtttatgccctg
gctaacgagtataagtttgaggtaattgagctcaacgcaagtgatgacagaacttttggt
aaaatagagcgctacctcaatgcggcatatacaatggatgtttttggaaggaggagaaaa
cttatctttcttgatgaggcggataacatagagccttcaggggcaagagagatagcgaag
ctcatagacaaggcgaggaatcccataataatgtccgccaacagatactgggaggtacca
ttggagataagaaacaaagcagaaatagtggagtacaagcgtttaagccagagggatatt
ttaaaggctctctttaggattgtaaaagcggagggtattttcgttcctaaagaagtcctg
caggaaattgcaaaaagggctaggggagacttgagggcagcaataaatgacctccagaat
atcgtaagcggcggcgttgaagatgccgagcttgttctggcatatagggatgttgagaag
tcgatttttgaagctctaggcatgatatttgccacagataatgcgaaaagggcaaaaatg
gccctcatgaaccttgacaacaccccagacgaagttcttctctggattgaagaaaacatt
ccctatgtgtattacaagccagaggacattgcgagggcatatgaagccataagcagagcc
gatatataccttggaagggcaacaagaacggggaactacggtttgtggaagtatgcagta
gacatgatgactgctggagtcgctgtttcaggggtaaagaaaaaaggcttcttgcgcttc
tacccaccaaaaactctcaaaatgctcagggatactaaggaggagcggtctattagggac
tctatagtgaagaagataatgaaggaaatgcacatgagcaaacttgaagcaattgagacg
atgcagatattcaaagccatgtttattaacaacccagacgttgcggctcatatagcagtt
tttcttgacttaggggataaggagattgagttccttactgaggataaagaaaaggcggca
aagatcaaagggaagatgctggccattcatagaaagttgaaggaaacgaaaacggagctt
gaagtgagaattgaaacaattgaagctgaggctatcgatgaagaagaaatcagtaaagaa
gagccagaggaagaagaggttgaagaggctgaagaagttgaagaagaaataagggaagaa
aaagaagctgaagaaaagcccgaggaaaagaaagagaagaaaggcaaacaggcaactctc
tttgatttcctgaagaagtga

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