Thermococcus litoralis: OCC_06896
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Entry
OCC_06896 CDS
T02800
Name
(GenBank) RNA-binding protein
KO
K22469
ribonuclease FAU-1 [EC:3.1.26.-]
Organism
tlt
Thermococcus litoralis
Brite
KEGG Orthology (KO) [BR:
tlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tlt03009
]
OCC_06896
Ribosome biogenesis [BR:
tlt03009
]
Prokaryotic type
rRNA processing factors
OCC_06896
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF402
RNase_E_G
Topo-V_HhH_2_2nd
S1
DUF6252
Motif
Other DBs
NCBI-ProteinID:
EHR78994
UniProt:
H3ZM50
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All DBs
Position
complement(779619..781034)
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AA seq
471 aa
AA seq
DB search
MSTNSEVSVRIRGIYSTALTKLLLDEGFKISQPSQKIAERLGIEKVYDEFDVDIQDKKDS
HGVVLVGEKVEEVKKVFEEKFLDVFFRKMPYQLYGIYKGIVIKKDERYVYVDIGNAIGTL
LIEEFPDAVEGDEVLVQVKKNNLLPHLSVLLTIPGDYAVLIPKPVGTQRHVKISRKIRDQ
SERERLRILGLSVDLGEWGVLWRTAAAYKDWNLLRDELIKLSKIAEKLKEAEKYSAPAQI
VEGRDIYEVEFGGAAKAKLDDIRNTVVPTIEGHHKFKAYDPEFGFAVEIGEGILSKIPSQ
RKKVSEGFLEALINNKGPKQGWLFRFEHVKPDGQVIKIGPGEVVEVSLNPLKLKVRRNLK
PGRFYDGLDLPIEAGDYAITEIEEGKWWFKHSYYDRDGNLKGEYYNICTPVEIYPDKARY
VDLEVDIVKWPDGKKEIVDKEELKRHYEDGVISEKLYKAIVRLTQELFEKI
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaaactcagaggtttcggtgaggattagagggatatacagcacggctttgaca
aaattgctcctcgacgagggctttaagataagccagccgagccagaagatcgctgaaaga
ctgggcattgaaaaggtctacgatgagttcgatgtggatattcaagacaaaaaagactcc
catggtgtggtgctggttggagaaaaagttgaagaagttaagaaggtttttgaagagaag
tttttagacgttttctttagaaaaatgccctaccagctttatggcatatataaagggatc
gttatcaaaaaggacgaaagatacgtgtatgtggacatagggaatgcaattggaactttg
ctaatagaagagtttccagatgctgttgaaggggacgaggtgcttgttcaggtcaagaaa
aacaacctccttcctcatttgagtgtcttactcactatacccggtgactatgcagtgctt
attccaaaacccgttggaacccagagacatgtgaaaatatcgaggaagattagggatcaa
tcagagagagaaaggcttagaatacttggattgagtgtcgatcttggagaatggggggtt
ttgtggagaacggcagctgcgtataaagattggaatctcctacgggatgagctaataaag
ctttcaaagatcgctgaaaagctgaaagaggctgaaaaatactctgctcctgcccaaata
gttgagggtagagacatctacgaggttgaatttggcggtgcggcaaaggcaaagcttgac
gacataagaaatacggtagttcctacgatagagggccatcacaagtttaaggcatacgat
cccgagtttgggtttgcagttgaaattggagagggaattctaagcaagattccctctcag
agaaaaaaggttagtgagggctttttggaggcattgattaacaataaggggccaaagcag
ggatggcttttcaggtttgagcacgttaagccagacggtcaagtaatcaagataggccca
ggggaagtggttgaggtttctctaaatcccctgaagctgaaggtaagaaggaatctaaaa
cccggtagattctatgatggcttggacttaccaatagaagctggggattatgcaataact
gagattgaagaaggaaaatggtggtttaagcatagctattatgatagagatggcaaccta
aagggagaatactacaacatctgcaccccggttgagatatacccggacaaagcaaggtac
gttgacttagaagttgatatcgtgaagtggcctgacgggaagaaggagattgtagacaaa
gaagaactcaagaggcactacgaagatggggttataagtgagaagctgtacaaggctata
gtaagattgactcaggagctttttgaaaagatttag
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