Thermococcus litoralis: OCC_07451
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Entry
OCC_07451 CDS
T02800
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
tlt
Thermococcus litoralis
Pathway
tlt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tlt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OCC_07451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tlt03021
]
OCC_07451
Transcription machinery [BR:
tlt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
OCC_07451
Prokaryotic type
Archaeal type
TFE
OCC_07451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
Rad50_zn_hook
DUF7342
Sigma70_r3
Zn_Ribbon_TF
Sigma70_r4_2
Prefoldin_2
TrmB
HTH_Crp_2
GMNC_CC
WHD_POLR3C
HTH_IclR
HTH_9
Rrf2
DicA_C
RepL
DUF1660
HVO_A0261_N
HTH_23
HTH_24
GAMMACA1_C
GcpE_C
Motif
Other DBs
NCBI-ProteinID:
EHR79305
UniProt:
H3ZL55
LinkDB
All DBs
Position
complement(1723047..1723562)
Genome browser
AA seq
171 aa
AA seq
DB search
MARRKNKELLKFAEEIGGEEAIEVIKALEKKKEATDEEIAEMTGIRVNTVRKILYALYDN
QLAEFRRVRDKDTGWYYYYWRLETKRLPEIIRARKMQELKRLKEMLEEETKEVYYHCGTP
GHPRLTFDEAMEYEFRCPLCGEMLMQYDNSEIVKELQEKIKKLEKELGIKA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggccagaagaaaaaacaaagaactcctgaaattcgcagaggagataggcggagaagag
gcgattgaggtaatcaaggctctcgaaaagaagaaagaggcaaccgatgaagagatagcg
gagatgactggaattagggtaaataccgtcagaaaaatcttatatgccctctacgataat
cagcttgcagaatttagaagggttagggacaaagatacgggatggtactactattactgg
cgcctcgaaacaaaaagattgccggaaatcataagggcaagaaaaatgcaggagctcaaa
agattaaaagagatgcttgaggaggaaactaaagaagtttactaccactgcggaactccc
ggtcatccaagactgacttttgatgaggcaatggagtatgagttcagatgccctctgtgc
ggtgaaatgcttatgcagtacgacaacagcgaaatagttaaagagctccaagaaaaaatc
aagaagcttgaaaaggaactgggaataaaggcgtga
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