Thermococcus litoralis: OCC_08475
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Entry
OCC_08475 CDS
T02800
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tlt
Thermococcus litoralis
Brite
KEGG Orthology (KO) [BR:
tlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tlt03032
]
OCC_08475
03400 DNA repair and recombination proteins [BR:
tlt03400
]
OCC_08475
Enzymes [BR:
tlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OCC_08475
DNA replication proteins [BR:
tlt03032
]
Prokaryotic type
DNA Topoisomerases
OCC_08475
DNA repair and recombination proteins [BR:
tlt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OCC_08475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Lar_restr_allev
DUF1272
DUF4364
zf-FPG_IleRS
DUF7351
Motif
Other DBs
NCBI-ProteinID:
EHR79507
UniProt:
H3ZKS5
LinkDB
All DBs
Position
2067156..2068370
Genome browser
AA seq
404 aa
AA seq
DB search
MFLSKNLVSKAPKNLNYESIIHNLAKIPDYKPHAHELLGKGVLKPVEGKKDDPAHPAIYP
TGELPKPGDLSKDEQNLYDLIVRRFLAAFADPAVRESMKVIINSNNHRFILSGSRTVKEG
WLKIYGKYVKFDEVLLPKFEKGERVKVIQIKREKKKTKPPARYSPASVIKKMEDLGIGTK
ATRAQILETLYSRGYIEGKKKIKVTPLGMKVIEALENNVPDIVSVELTREFEEKMEQIMQ
NKISKEKVIEESKEALVRILKEFKKKEGEIGRKLLETFLESQKNKKNKKNTDTKELTAEE
EESIKKSVEKRKSMDTIIVGKCPKCGGDLVVRYNRKTGKRFVGCSNWPNCDVTYPLLQRG
EIIPTGKTCPECGNAPIVKIKERNREYEVCLDMNCYKNRRKGKS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
ttgttcctatccaagaacctcgtctcaaaagctccaaaaaacttgaactatgaatcgatt
atccataaccttgccaaaattccggactacaaacctcatgctcatgaacttttgggtaaa
ggagttttaaaacccgtagaaggcaaaaaagatgatcctgctcacccggcaatatatccc
accggtgagctacctaaacctggagatctaagcaaagatgagcaaaatctttacgattta
atagttaggagattcctagctgcattcgctgatcctgccgtaagggagagtatgaaagta
atcataaattcaaacaaccaccgctttatcctcagcggttcgagaacagttaaagaggga
tggctgaagatttacggcaagtatgttaaatttgatgaagttttgcttccaaagtttgag
aaaggagagagagttaaagttattcagataaagagggagaagaagaaaaccaaacctccg
gcaaggtattctccagcaagcgttatcaagaaaatggaagacctaggcattggaactaag
gccacaagggctcaaatcctagaaactctatattcaaggggatacatagagggcaagaaa
aagataaaggtgacccctctcggcatgaaggtgatagaagccttggaaaacaatgtccct
gatatagtaagcgttgaactaacgagagagttcgaagaaaaaatggaacagataatgcag
aacaaaataagcaaggagaaggtcattgaggaatccaaggaagccttagtaagaattcta
aaggaattcaaaaagaaagagggagaaatagggagaaaacttctggaaacatttttagag
agccagaaaaacaaaaagaataagaaaaacaccgatacaaaagaactaactgccgaagaa
gaggaaagcatcaaaaaatctgttgaaaagagaaaatctatggacactataatagtgggg
aagtgtcctaaatgcggcggcgacttagtggttagatataatagaaaaacaggaaaaaga
tttgtgggctgctccaattggcctaactgtgacgttacttatccccttctccaaaggggc
gagataattccaacgggaaaaacatgtcctgagtgcggaaatgccccaatagtgaagatc
aaggaacgcaacagggaatacgaggtatgccttgatatgaactgctacaaaaatcggaga
aaaggtaaaagttag
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