Thalassospira lucentensis: R1T41_04840
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Entry
R1T41_04840 CDS
T09476
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tlu
Thalassospira lucentensis
Pathway
tlu00061
Fatty acid biosynthesis
tlu00071
Fatty acid degradation
tlu01100
Metabolic pathways
tlu01212
Fatty acid metabolism
tlu02024
Quorum sensing
tlu04146
Peroxisome
Module
tlu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tlu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
R1T41_04840
00071 Fatty acid degradation
R1T41_04840
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
R1T41_04840
09145 Cellular community - prokaryotes
02024 Quorum sensing
R1T41_04840
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tlu01004
]
R1T41_04840
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tlu04147
]
R1T41_04840
Enzymes [BR:
tlu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
R1T41_04840
Lipid biosynthesis proteins [BR:
tlu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
R1T41_04840
Exosome [BR:
tlu04147
]
Exosomal proteins
Exosomal proteins of breast milk
R1T41_04840
Exosomal proteins of breast cancer cells
R1T41_04840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WOI11910
LinkDB
All DBs
Position
complement(902775..904724)
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AA seq
649 aa
AA seq
DB search
MSSNTPDYADVQALDTFPKVLAYNARHWGDEIAMREKEFGIWQEFTWKDYNDRVKWMALG
LRDMGIKPGDVIGVIGENRPEWVWGEIAAHALRAMSVGLYRDSLHEEVAYLITYSGARVL
IAEDEEQCDKLLELADQIPTVEHIVYCDPRGMRKYEDPRLMDIEKLYELGRAVEAKDPGA
YDGMVADTRGDECAILCTTSGTTSKPKMAMLNAGDFLDHCAAYLRADPKYPGDNYVSVLP
LPWIMEQVYVVGQSLISRQIVNFVEEQETMMADLREIGPNFVLLAPRVWEAIAADVRARM
MDATLFKQKMYDFGMALARTALDGGGHSRVADVLLMNALKDRLGFSNLRSAATGGAAMGP
ETFKFFHAMGVPLRQLYGQTELCGAYTIHQPDDIDFDTVGRAFDNSEIKIINTDENGVGE
IVARTSGMFTSYYKNQAAYDEDVRDGWMHTGDAGYFKEGNKHLVVIDRLKDLAETSKGVR
FSPQFIENKLKFSPFIAEAVILGKGLPFLSTMICIRYSIMAKWAEQRGIAFTNYTNLSAQ
PQVYDMIVDEIRQVNETLPEAQRIKRFLLLYKELDADDGELTRTRKVRRSVVAEKYADII
DAVYAGNEKVDIDTMITFQDGSKTRIQTSVKVVDLDGDKAAQTAPKAAE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaatacacccgattatgccgatgtgcaggcgcttgatacctttccgaaggtg
ctggcttataacgcgcgccactggggcgacgaaattgccatgcgcgaaaaggaattcggc
atctggcaggaattcacgtggaaagattataacgaccgcgtcaaatggatggcgcttggc
ctgcgcgatatgggcatcaagcccggtgatgtgatcggcgttatcggcgaaaaccgcccg
gaatgggtctggggcgaaattgccgcccatgcgctacgtgccatgtcggtcggcctgtat
cgggacagccttcatgaagaagtcgcctatctgatcacctattccggtgcgcgggttctg
atcgccgaggacgaggaacagtgtgacaagcttctggaactggccgaccagattccgacg
gttgaacatatcgtttattgcgatccgcgcgggatgcggaaatacgaagacccgcgcctg
atggatatcgaaaagctttacgagcttggccgtgcggtcgaggcaaaagaccccggtgcc
tatgacggcatggtggccgatacgcgcggtgatgaatgcgcgatcctgtgcaccacgtca
ggcacgacgtccaagccgaaaatggcgatgctgaatgccggtgatttccttgatcactgt
gcggcctatttgcgggccgacccgaaatatccgggtgacaactatgtttcggttctgccg
ctgccatggatcatggaacaggtttatgtcgtcggtcagtcgctgatcagtcgccagatc
gtcaattttgtcgaagaacaggaaaccatgatggccgatcttcgcgagatcggaccgaac
ttcgtcctgctggcgccgcgcgtctgggaagccattgccgccgatgtgcgggcacgcatg
atggatgcgaccctgttcaaacagaaaatgtatgatttcggcatggctctggcgcgcaca
gcccttgatggcggcggtcattccagggttgccgatgtcctgttgatgaatgcgttaaag
gaccggttgggcttttccaatctgcggtcggcggcgaccggcggggcggcgatggggccg
gaaaccttcaagttctttcatgccatgggcgtgccgttgcgccagctttacgggcagacc
gaactttgcggtgcctataccatccatcagcccgacgacattgatttcgatacggtcggg
cgcgcgttcgacaattcggaaatcaaaatcatcaataccgatgaaaacggcgttggcgag
attgttgcgcgcacatcgggcatgtttaccagctattataaaaaccaggcggcctatgac
gaggatgtccgggatggctggatgcatacgggcgatgccggttacttcaaggaaggcaac
aagcatcttgtggtgattgatcgcctgaaagatctggcggaaacatccaaaggtgtgcgt
ttttcgccgcagtttattgaaaacaaactgaaattctcgcccttcattgccgaggccgtg
atccttggcaagggattgccgttcctgtcgaccatgatctgcatccgttattcgatcatg
gcgaaatgggccgagcagcgcgggattgcctttaccaactataccaatctgtcagcccag
ccgcaggtctatgacatgatcgttgatgaaatccgtcaggtgaatgaaaccctgccggaa
gcccagcgcatcaagcggtttctgctgctttacaaggaactggatgccgatgacggcgaa
ctgacgcgtacccgcaaggttcgccgcagcgtggttgcggaaaaatacgccgacatcatc
gacgcggtttatgctggcaatgaaaaggttgatatcgacaccatgatcaccttccaggac
gggtcaaaaacccgcatccagacaagtgtgaaggtcgtcgatctggacggggacaaggcc
gcacagacggcccccaaagccgccgaataa
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