Thalassospira lucentensis: R1T41_05195
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Entry
R1T41_05195 CDS
T09476
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
tlu
Thalassospira lucentensis
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS_9
PAS
Sigma54_activ_2
PAS_4
PAS_8
AAA_5
PAS_3
AAA
AAA_16
Mg_chelatase
PAS_7
HTH_8
Diguanyl_cycl_sensor
TIP49
GAF_PdtaS
AAA_22
T6PP_C
IstB_IS21
AAA_7
DUF815
AAA_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WOI11979
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Position
984630..986573
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AA seq
647 aa
AA seq
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MDQIANPPPPTVSDALYQQALASHIHPTLLVHPQSDRIMFANQAAAHLLGRSIADLKSTA
MSSLHKGQVPSLVVFSQAALYHGFAWTRGLNLMHADGTEIQLEHEARALHWEGEDYLIII
LCDLDARHRRDVDAEADNYLREGIAEWRRAERFFREIERENQLILGAAGEGIYGVNSDGI
TTFVNPAAERMLGWTAEELVGKEIHSIIHHSHINGDPYHAEHCPIYNAFREGIVRRVDDE
VFWRSDGKPIRVEYTSTPIRDHGLVIGAVIVFRDITERKIAEEKLHAALAEVDRLRERLE
LENAYLQEEILSTNNHHEIIGQSEAINSALKQIDLVAPTDANVLITGESGTGKELIARAI
HQASHRRDRVLVRVNCAAIPHELFESEFFGHVRGAFTGAVRDRVGRFELADGGTLFLDEV
GEIPLELQGKLLRVLQDQKFERIGEERTREVNVRLLAATNRDLKEEVRLGRFREDLYFRL
NVFPIECRPLRERPDDIPPLATHFLRNICQRLNIPQLTLTNGQVRSLMKYDWPGNARELE
NIIERAAILARDGKLNFDLPEPNRRETDHGNANPARDQASPQSAILTEDDRRKREYDNII
RALETTRGRIFGPDGAAALLNVKPTTLASRIKKLRIDRRDFTPSGQP
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggatcagattgcaaacccgccacccccaacggtttcggatgccctgtatcaacaggcc
cttgcatcgcatattcatccgactttgctggtgcatccgcaaagtgatcgcatcatgttt
gccaatcaggcggcggcgcatttgctgggccgcagcattgcggaccttaaatctaccgcc
atgagcagcctgcacaaggggcaggtgccaagccttgtggtgttcagtcaggccgccctt
tatcacggcttcgcctggacgcggggccttaacctgatgcatgcggatggcaccgaaatc
cagcttgaacacgaagcccgcgccctgcactgggagggcgaggattacctgatcatcatc
ctgtgtgaccttgatgcccgccaccgccgcgacgtcgatgccgaggccgataattacctg
cgcgaaggcattgccgaatggcggcgtgccgaacggtttttccgcgaaatcgaacgcgaa
aaccagttgatcctgggggcagcgggcgaaggcatttacggggtcaacagcgacggcatc
accaccttcgtcaatccggctgccgaacggatgctgggctggacggccgaggaactggtg
ggcaaggaaatccattcgatcatccaccattcgcatatcaatggcgatccctaccacgcc
gaacattgcccgatttacaatgcgttccgcgaaggcatcgttcggcgggttgatgacgag
gttttctggcgcagcgacggcaaaccgatccgggttgaatatacctccaccccgatccgc
gatcatgggctggtgattggcgcggtgatcgtgtttcgcgatatcaccgaacgcaagatt
gccgaggaaaagctgcatgcggcgcttgccgaagtcgaccgcctgcgcgaaaggctcgaa
cttgaaaacgcctatctgcaggaagaaatcctgtcgaccaacaaccaccatgaaatcatc
ggccagtccgaggcgatcaatagtgcgcttaaacagatcgatctggtcgccccgaccgat
gccaacgtcctgatcaccggggaatcggggaccggcaaggaactgatcgcgcgcgccatc
catcaggcaagccaccggcgcgaccgtgttctggtgcgcgtgaactgtgccgccatcccc
catgaactgttcgaaagcgagtttttcggccatgtccgcggtgcctttaccggggccgtg
cgcgatcgcgtcgggcggttcgaactggccgatggcggaacgctatttctggacgaggtc
ggtgaaatcccgctggaactacagggcaagcttttgcgcgttctgcaggatcagaagttc
gaacgcatcggcgaggaacgcacgcgagaggtcaatgtaaggctattggccgcaaccaac
cgcgatctcaaggaagaagtccggctcggccgcttccgcgaagatctgtatttccgcctg
aatgtgtttcccatcgaatgccggccgctgcgcgaacggcccgacgatatcccgcccctg
gcgacacatttcctgcgcaatatctgccagcggctgaacattccgcaactgacgctcacc
aacgggcaggtccgaagcctgatgaaatatgactggccgggcaatgcgcgcgaacttgaa
aacatcatcgaacgcgccgccattctggcgcgcgacggtaaactgaattttgacctgccc
gaacccaaccgccgcgaaacagatcatggcaatgccaaccccgcacgtgatcaggccagc
ccccaatcggcaatcctgaccgaagatgaccggcgcaaacgcgaatatgacaatatcatc
cgcgcccttgaaaccacacgcggccggatttttggccccgatggcgcggcagcccttttg
aatgtaaagccgacaacactggcatcgcggatcaaaaagcttcggattgaccggcgcgat
ttcacgccatcgggccaaccctag
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