Thalassospira lucentensis: R1T41_06550
Help
Entry
R1T41_06550 CDS
T09476
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
tlu
Thalassospira lucentensis
Brite
KEGG Orthology (KO) [BR:
tlu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlu03400
]
R1T41_06550 (addA)
Enzymes [BR:
tlu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R1T41_06550 (addA)
DNA repair and recombination proteins [BR:
tlu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
R1T41_06550 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
WOI12240
LinkDB
All DBs
Position
complement(1305260..1308721)
Genome browser
AA seq
1153 aa
AA seq
DB search
MTEIRGTDPNILQRNASDPMASVWVSASAGAGKTKVLSDRVLRLMLSGTEPHRILCLTFT
KAAAAEMANRVNERLGHWATMEDRELHDDLFNLAGTAPSVDETRRARRLFASVLDAPGGM
KIQTIHAFCQSLLRRFPLEAGLAPHFEIMDDRTAAETMADVQEEVLAFARNGRDDDLADA
LSVVTGQVREGAFGEVMGELARERGRLKRMLAHHGGANRMRDAVYAALGVPVGQDEDAVL
RRALSDDAFDRDGLMRGLAALEAGTKTDQDRVPALAQFLEKTGIEDRLTVFSDYRGVFFT
AAGEPRAKLITKKAAENHPMGADALEAECARLIEVDRLRKAAALAGATAALISIGNAMLD
RYAAKKALHARLDYDDLILTSLWLLQQQAGIAGWVLFKLDEGLDHILIDEAQDTNPEQWE
VVRILAEEFFAGAGQHDEKPRTIFAVGDAKQSIYSFQRADPEKFTQMRAYFRERAREIEA
EWREVPMNISFRSTDAVLGTVDRVFAGMIAKQGVGDDGADVSHSPFRVGQAGRIELWPAV
EPQERAAEDPWTPPTRIVRLEDPEIRLARVIAGRIRHAIDTREELTSRGRPVRAGDFMIL
VRRRTAFVDEVVKALKERNVPVAGVDRMQITDQLAVMDLIAFGRFLLMPEDDLTLAEVLK
SPLIGFDDDQLFAIAHNRPRTLWLALREKAGSDDADPAFLSAYEFLFKWLGRVDYERPFE
LFAELLGGRGDDARGVRARLVGRLGIEANDPIDEFLNLAMGYEADHAPTLQGFLHWLMAG
DAEIKRDLEQSGRDEVRIMTVHGAKGLQAPIVFLPDTMQVPTQAPNLFWQEDRDLMYWLP
RVALETDVVARLRDGIAIKRDQEYNRLLYVALTRAEDRLYICGWQGKRKAPDHCWYNLCQ
QAMEGYARSEPFDFSDFSGSGWAGDGWVWETDQREALRADKVETAIGATDLPKRTLIRDI
APIEAFPPKPLAPSRPLEEEPSVQSPLGGDQGQSFKRGLLIHKLLELLPDLPEAKRRAAA
ERFLAQPVHALDADQQREITNETIAIFENPEFAPVFDAGSKAEVPLVGIVGGDVVSAQID
RLVVRENEVMIVDFKTNRPPPRDVEGTPRAYRRQMSIYRAALSQMYPDKRIRCFILWTNG
PWMVELPEHIMRL
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaattcgcggcaccgatcccaatatcctgcaacgcaatgcgtctgacccgatg
gcatcggtctgggtgtcggcatcggccggtgcgggcaagacaaaggttctgtcggaccgg
gtgttgcgcctgatgttgtcggggactgaaccccatcgcatcctgtgtctgacctttacc
aaggccgccgcggcggaaatggccaaccgtgtcaatgaacggctgggtcattgggccacc
atggaagatcgtgaacttcatgacgatcttttcaatctggctggaaccgcgccaagcgtt
gatgaaacgcgtcgcgcgcgccgcctgtttgcctcggtccttgatgcgccgggcgggatg
aaaatccagacgatccatgctttttgccagtcattgctgcgccgtttcccgcttgaggcc
ggtctggcaccgcattttgaaatcatggacgaccggactgcggccgaaaccatggccgat
gtacaggaagaagtgctggcctttgcccggaatggccgggacgacgatctggcggatgct
ctgtcggtcgtgaccggacaggtccgcgaaggtgcctttggcgaagtcatgggtgaactg
gcgcgtgaacgtggccgtttgaaacgcatgctggcccatcatggtggtgccaaccggatg
cgtgatgcggtttatgccgcccttggtgttccggtcggacaggacgaggatgctgtattg
cgcagggctctgtctgatgatgcgtttgaccgcgacggcctgatgcgcgggttggccgcg
ttggaggccgggaccaaaacagatcaggaccgcgtcccggcactggcgcaattccttgaa
aaaaccggtatcgaggatcggctgacggtgttttcagattatcgtggtgtcttctttacc
gccgcaggcgaaccgcgcgccaagctgatcacgaaaaaggccgccgaaaatcacccgatg
ggggccgatgcgctggaagccgaatgtgcgcgcctgatcgaagtcgaccgtttgcgcaag
gccgctgctttggccggggcgacggcggccctgatcagcatcggaaatgcgatgctggat
cgttatgccgccaaaaaggccctgcatgcccgccttgattatgatgatctgatcctgacc
agcttgtggttgttgcaacagcaggccgggattgcagggtgggttttgttcaaactcgac
gaaggtcttgaccatatcctgattgacgaggcacaggacaccaaccccgaacaatgggaa
gtggtgcgcattctggccgaggaattctttgccggtgcggggcaacatgatgaaaaacca
cggacaatctttgccgttggggatgcgaaacaatcgatttacagcttccagcgcgccgat
cccgaaaaattcacccagatgcgggcttatttccgcgaacgggcacgcgaaatcgaagcc
gaatggcgcgaagtcccgatgaatatatcgtttcgttcgaccgatgccgtgctgggcacg
gtggaccgggtttttgccgggatgatcgcgaaacagggggtgggcgatgatggtgccgat
gtcagccacagtccgttccgtgtcgggcaggccggtcggatcgaattgtggccggcggtg
gagccgcaggaaagagccgccgaggacccgtggaccccgccaacccgtatcgtgcgcctt
gaggacccggaaatccgccttgcgcgggtcatcgccgggcgtatccgccatgcaatcgac
acccgggaggaactgacatcgcgcgggcgtccggtgcgggcaggtgatttcatgatcctg
gtgcggcgtcggacggcctttgtcgacgaggtcgtcaaggcgctgaaggaacgcaacgtt
ccggttgccggtgttgaccgtatgcagatcaccgatcagcttgccgtgatggacctgatc
gcctttggccggtttcttttgatgcccgaagacgacctgacattggccgaggtcctaaaa
agcccgctgatcgggtttgacgatgatcagttgtttgcaattgcccataaccgtccccgc
accctttggcttgccttgcgcgaaaaggccggcagtgatgatgccgatccggccttcctt
tcggcctatgaattcctgttcaaatggctggggcgggttgattacgaacgcccgtttgaa
ctgtttgccgagcttctgggcgggcgtggcgacgatgcgcgcggggtgcgcgcccgtctg
gtcgggcggctcgggatcgaggcaaatgacccgattgacgaattcctcaaccttgccatg
ggatacgaagccgatcatgcgccgaccttgcaggggttcctgcactggctgatggcaggg
gacgccgaaatcaagcgtgaccttgaacaaagcggccgtgacgaggtccggattatgacg
gtgcatggggctaagggcctgcaggcgcccatcgtattcctgcccgataccatgcaggta
cccacacaggcccccaacctgttctggcaggaagatcgcgatctgatgtattggctgccg
cgtgtggcactggaaaccgatgtggttgcgcggttgcgtgacggtatcgcgatcaagcgc
gatcaggaatataaccgcctgctttatgtcgccctgacgcgtgccgaagaccggctttat
atctgcggttggcagggcaagcgcaaggcacccgatcattgctggtacaatctgtgccag
caggccatggagggctatgcccggtccgagccgtttgatttttccgatttttccgggtcc
ggctgggccggtgatggctgggtatgggaaaccgatcagcgcgaagcactccgggccgac
aaggtcgaaaccgcaatcggtgcgacagatttgcccaaacggaccctgattcgcgatatc
gccccgatcgaggcctttccgcccaagccactggcaccaagccgcccgctggaagaagaa
ccgtctgtgcaatcgccattgggcggggatcagggccaaagcttcaaacgcggccttctg
atccacaaactgcttgaattgttgcctgacctgcctgaagccaaaaggcgggcagctgcc
gaacggttccttgcccagccggttcatgcgcttgatgcagaccagcagcgcgaaatcacc
aatgaaacaatcgcgatttttgagaatcccgaattcgcacctgtttttgatgccggatca
aaggccgaggtgccgctggtcgggatcgtcggcggggacgtcgtttccgcacagattgac
cgtctggttgtgcgtgaaaacgaggtcatgatcgttgattttaaaacaaatcgtccgccc
ccgcgcgatgtcgaggggacaccacgtgcctatcgtcggcagatgtcgatttaccgggcc
gcattaagccagatgtatccggacaaacgcattcgctgtttcatcctttggaccaacgga
ccatggatggtagagctgcccgaacacatcatgagactgtaa
DBGET
integrated database retrieval system
