Thalassospira lucentensis: R1T41_07205
Help
Entry
R1T41_07205 CDS
T09476
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tlu
Thalassospira lucentensis
Pathway
tlu03030
DNA replication
tlu03410
Base excision repair
tlu03420
Nucleotide excision repair
tlu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R1T41_07205 (polA)
03410 Base excision repair
R1T41_07205 (polA)
03420 Nucleotide excision repair
R1T41_07205 (polA)
03440 Homologous recombination
R1T41_07205 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tlu03032
]
R1T41_07205 (polA)
03400 DNA repair and recombination proteins [BR:
tlu03400
]
R1T41_07205 (polA)
Enzymes [BR:
tlu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R1T41_07205 (polA)
DNA replication proteins [BR:
tlu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
R1T41_07205 (polA)
DNA repair and recombination proteins [BR:
tlu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
R1T41_07205 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R1T41_07205 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Taq-exonuc
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
WOI12370
LinkDB
All DBs
Position
1447595..1450420
Genome browser
AA seq
941 aa
AA seq
DB search
MTDSAPSTGKSPRRVVLVDGSGFIFRAFHALPPMTSPDGTPVNAVYGFCTMLMKLREDTK
PDHMAVIFDTKGKSFRNDFYPEYKAHRPPPPEELVPQFGLIRDATRAFNLPSIELEGYEA
DDLIATYARQAEAEGSDVIIVSSDKDLMQLVTDRVQMFDAMKNRTIGAPEVLEKFGVTPD
KVIDIQALAGDSVDNVPGVPGIGIKTAAQLIDEYGDLDGLLERAGEIKQPKRREKLIENA
ELARISRDLVTLKTDVPVVEKLDGFELREPDPDVLLSFVSTHGFKSLVSKIKAKFGGSVD
AEGIVEPGTGVNDISVEKAEYELVQDEDRLRHWISMAEYAGTLAVDTETTSLNAHQAKLV
GISLSTEPGNGCYIPVGHGQGHSESGEAQGGFDFDAPAEAPAKIDVPKQIPLDRAIALLK
PLLEDPGVLKVGQNLKYDMIVLSRHGINVAPIDDTMVLSYVLDGTSHGHGMDELAELHLD
YKPIKFSDVCGSGKTQITFDQVPLDKALEYAAEDADITLRLHRLLKPRIAQEHMASVYET
LDRPLVPVLAKMESLGIRIDADKLKTLSNDFAKRMAALEETIHEMAGEPFNLGSPKQLGE
ILFEKMRLPGGKKTKTGAWQTGADVLEALAAQGHDLPTKILEWRQLSKLKSTYTDALAHH
INPETGRVHTSYGQTNVNTGRLSSNDPNLQNIPIRSEEGRKIRTAFISEPGCKLISADYS
QIELRLLAHVAEIDALRDAFKDGKDIHAATASKVFGVPIEGMDPMVRRKAKAINFGIIYG
ISAFGLANQLGIPQKEAKAFIEAYFEIYPGIRDYMEQAKDFAKKHGFVRTLFGRQIHING
INDKNGMRRSFGERAAINAPIQGGAADIIKRAMIAVPGALLDAGLKTRMLLQVHDELIFE
APEDETEKAVKVIREVMENAAQLSVPLIADAGIGDSWADAH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgacagattctgcgccatccaccggtaaatccccccgtcgcgttgttctggttgacgga
tcgggctttattttccgggccttccatgccttgcctccgatgaccagtccggatggtaca
ccggtgaatgcggtgtatggtttctgtaccatgctgatgaaattgcgcgaagataccaag
cccgatcatatggcggttatcttcgataccaagggtaagtcgttcagaaacgacttctat
cccgaatacaaagcgcaccgtccgccgccgcccgaagaactggtcccccagttcgggctt
atccgcgatgcgacgcgtgccttcaacctgccttcgatcgaactcgaaggatacgaggcc
gatgatctgatcgcgacctacgcccgacaggctgaggccgaaggttccgatgtgattatc
gtgtcttcagacaaggacctgatgcaacttgtcacggaccgggtgcaaatgtttgatgcg
atgaagaatcgcaccattggcgcaccagaggttctcgaaaaattcggcgtcacaccggat
aaggtcattgatattcaggcattggctggcgattccgttgataacgtacccggtgtacca
ggcatcggtatcaaaaccgcagcccaactgattgatgaatatggcgatctggatggtttg
ctggaacgtgcaggagaaatcaagcaacccaaacgccgtgagaaactgatcgagaatgcc
gaactggcccgcatttcgcgcgatctggtgaccctcaaaaccgacgttccggttgtcgag
aaacttgatggtttcgaactgcgcgaacctgatccggatgttcttttaagctttgtttca
acacacggctttaaatctttggtttctaaaataaaggcgaaattcggtggttctgttgat
gccgagggcattgtcgaacccggaaccggtgtcaatgatatcagtgttgaaaaggcagaa
tatgaacttgtgcaggatgaagaccgcctaagacactggatttcaatggctgaatatgcc
ggtacgcttgctgtcgataccgaaaccacatcacttaatgcccatcaggccaagctggtt
ggcatttcgctttcgaccgaaccgggcaatggttgttatatccctgtcggacacggacag
ggtcacagcgaaagtggcgaagcgcagggtggtttcgatttcgatgcccctgccgaggca
ccggcaaaaatagatgtcccaaaacaaatcccgcttgatcgcgcgattgccttactcaaa
cctcttctggaagacccgggcgttcttaaggtcggccagaacctgaaatacgatatgatc
gtattgtcccgtcatggcatcaatgtcgccccgatagacgacaccatggtgctgtcctat
gttctggacggcacaagccacggccatggcatggatgaattggccgaactgcatctggat
tacaaaccaatcaagttttccgatgtttgcggatcgggcaagacccagatcacgtttgat
caggttccgctcgacaaggcgcttgaatacgctgccgaagacgccgatatcacattgcgc
ctgcaccggcttctgaagccccgcattgcgcaggaacatatggccagcgtctatgaaacg
ctggatcggccgcttgtaccggtactggccaaaatggaaagccttggcatccgtattgac
gcggacaaactcaaaaccctatcgaacgattttgccaaacggatggccgcccttgaagaa
accatccatgaaatggccggtgaaccgttcaatctgggcagccccaaacagcttggcgaa
atcctgtttgaaaagatgcgcctgccgggcgggaaaaagaccaaaaccggtgcgtggcag
accggcgcggatgttcttgaagcattggcggcccagggacatgacctgccaaccaaaatc
cttgaatggcggcagctttcaaagcttaaaagcacttataccgacgcgcttgcccatcat
atcaatccggaaaccggccgcgtccacacaagttacggccagaccaatgtgaataccggt
cgtctgtcgtcaaacgacccaaacctgcaaaacattccgatcagaagcgaggaaggccgt
aaaatccgtactgcctttatctcggaacccggttgcaaactgatttctgccgactattcg
cagattgaattgcgtcttctggcgcatgtcgccgaaatcgacgccctacgcgatgcgttc
aaagatggcaaggatatccacgccgcgacggcatccaaggtattcggcgtaccaatcgaa
ggcatggatccgatggtccgccgcaaagccaaggccatcaatttcggcatcatttacggt
atttcggcctttggcctcgccaaccagcttggtatcccgcaaaaagaagccaaagccttt
atcgaagcctatttcgaaatctatcccggcattcgcgattacatggaacaggccaaagat
ttcgccaaaaagcatggctttgtcagaaccctgtttggccgccagattcatatcaacggc
atcaatgataaaaacggcatgcgccgaagctttggcgaacgtgccgcgatcaacgccccg
attcagggcggtgctgctgacatcatcaaacgcgcgatgattgccgttccgggtgcgctt
cttgatgcggggcttaaaacccgcatgctgcttcaggtccacgatgaattgatatttgaa
gcccctgaagacgaaaccgaaaaagccgtcaaggtgatccgtgaggtcatggaaaatgcc
gcacagctgtccgtaccgcttatcgcggatgccggtatcggggatagctgggcggatgcc
cattga
DBGET
integrated database retrieval system
