Thalassospira lucentensis: R1T41_07330
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Entry
R1T41_07330 CDS
T09476
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tlu
Thalassospira lucentensis
Brite
KEGG Orthology (KO) [BR:
tlu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tlu03016
]
R1T41_07330
Enzymes [BR:
tlu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
R1T41_07330
Transfer RNA biogenesis [BR:
tlu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
R1T41_07330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WOI12393
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All DBs
Position
complement(1476400..1477011)
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AA seq
203 aa
AA seq
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MTNFLYHGDLPDGLDLGKVVAVDSETMGLNPHRDRLCVVQLSAGDGDAHLVKFDGENYEA
PNLKKLLADPSVLKLFHFGRFDIAVMDKYLGVRCAPVYCTKIASKLVRTYTDRHGLKDLV
RELVDVNLDKQQQSSDWGSADLSDEQITYAASDVLYLHKAKEELDRRLAREGRTELAQAC
FEFLPTRATLDLLGWEETDIFAH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatttcctctatcacggagatttgcccgacgggcttgatcttggcaaagtcgtt
gccgttgacagcgaaacgatgggccttaatccgcaccgcgatcgtctgtgcgttgttcag
ctttcggctggtgatggggatgcccatctggtgaagtttgacggggaaaattatgaggca
cctaaccttaagaagcttttggctgatccgtcggttctgaagctgtttcactttgggcgg
ttcgatatcgccgtgatggacaaatatctcggtgtgcggtgcgcacctgtctattgcacc
aagatcgcatcgaaactggtgcgtacctataccgaccggcatggcctgaaggatctggtg
cgcgaactggttgacgttaatctggacaagcagcagcaaagttctgactggggatcggct
gatctttcagacgaacagattacctatgctgcatccgatgtgctgtatctgcataaggcc
aaggaagagcttgatcgtcgtttggcccgggaaggtcgcaccgaactggcacaggcctgc
tttgagttcttgccgacacgggcgacgctggatctgttgggttgggaagagacggatatt
ttcgcgcactaa
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