Thalassospira lucentensis: R1T41_10945
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Entry
R1T41_10945 CDS
T09476
Name
(GenBank) short-chain fatty acyl-CoA regulator family protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
tlu
Thalassospira lucentensis
Brite
KEGG Orthology (KO) [BR:
tlu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tlu03000
]
R1T41_10945
Transcription factors [BR:
tlu03000
]
Prokaryotic type
Helix-turn-helix
XRE family
R1T41_10945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
HTH_3
Peptidase_M78
HTH_31
HTH_19
HTH_26
HisKA
HVO_2718
DUF7979
PaaA_PaaC
Motif
Other DBs
NCBI-ProteinID:
WOI13093
LinkDB
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Position
complement(2239375..2240958)
Genome browser
AA seq
527 aa
AA seq
DB search
MSRQAPIGHRIRGRRKDIGLTQNALAKAAGISPSYLNLIEHNRRAIGGGLLLRLASALEI
QPHALSGSEESRLLADLGEAATDPVFRETPLIPREFPAMIAAAPGMISAFLSLYRAYRNG
LEEIDNLSERLSHDPFLAEASHSILTRITSIRTVAEIFDDYDDLPAEQRARFNATLVRES
QRLAESATEIFSFLERGDAGRPAASPAEEVDDLLYDNANYFPTLEDRADEMRAVIDPAGG
LFLTDLIKHLERRHQIRVDRLPPEDLPASGFDWNRADSHLRFSRAMPITSTRFHAARIIC
RLEGEDTVNDILDRANLGTDAARQRAGEALISYFAAALLFPYDSFRAEAQILRHDIELLQ
QRFAASWEQVCHRLTTLRRPGAEGIPFHFMRTDIAGNISKRFSASGLQLPRYSGACPRWV
VHEAYLTPERVIPQFVRLPDESEYLFIARAVRTGAGGYRVPQSVYSVMIGCDTAFARDIV
YADGLPLDTPQAAVPVGIGCRQCPREECMQRAYAVADTGHEIHTTPK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcaggcacccatcggacaccgtattcgcggacgccgcaaagacatcggcctg
acgcagaatgccctggccaaggccgcgggaatttcgccctcttatctcaatctgatcgaa
cataaccgccgtgcgattggcggtggattactgctgcgcttggcaagcgcacttgaaatc
cagccccatgccctgtcagggtcggaagaaagccgcctgcttgccgatcttggcgaagcc
gcaaccgatccggtttttcgtgaaaccccgctgatcccgcgtgaatttccggcaatgatc
gccgcagcaccgggcatgatttccgccttcctgtcgctttatcgcgcctatcgcaacggg
cttgaggaaattgacaatctgtccgaacggctcagccacgatccgttcctggccgaggcc
agccattcaatcctgacccgcatcacgtcaatccggacagttgccgaaatctttgacgat
tacgatgatttgcctgccgaacaacgggcgcgcttcaacgccacactggtgcgggaatcc
caaagactggcagaatcagcaaccgagattttcagcttccttgaacgcggtgatgccggg
cgccctgccgccagccccgccgaggaagtcgacgacctgctttatgacaatgccaactat
ttcccgacactcgaagatcgagcagatgaaatgcgggctgtcattgatcctgcaggcgga
ttgtttctgaccgacctgatcaagcatctggaacgacgtcatcaaatccgggttgatcgt
ttgccccccgaagatttgcccgcatcggggttcgactggaaccgcgcggattcccacctc
agattttcacgcgcgatgccgatcacctcgacacgctttcatgcggcacggatcatttgc
cgactggaaggcgaggatacggtcaatgacatcctggaccgcgccaaccttggcaccgat
gccgcccgccaacgcgcaggcgaggccctgatatcctatttcgcagcggcccttctgttc
ccctatgacagcttccgggccgaggcccagattttgcggcatgacatcgaattgctgcag
caacgctttgccgcaagctgggagcaggtctgccaccgcctgacgaccttgcgccgcccg
ggtgctgaaggcattcctttccatttcatgcgcaccgatattgccggcaatatttccaaa
cgtttttcggcatccggcctgcaactaccgcgttacagcggtgcctgcccccgttgggtg
gttcacgaagcctatttgacgccagaacgggtaataccgcaatttgttcgcctgcccgat
gaaagcgaatatctttttattgcgcgtgcggtgcgtactggtgccggagggtatcgggtg
ccgcaatcggtttattccgttatgatcggttgcgacacggcctttgcccgtgacattgtt
tatgcggacggattgccgcttgataccccgcaggcagccgttccggttggcattgggtgc
cgacaatgcccacgtgaagaatgcatgcagcgcgcctatgcggttgccgatacagggcac
gagatccataccaccccaaagtag
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