Thalassospira lucentensis: R1T41_12275
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Entry
R1T41_12275 CDS
T09476
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
tlu
Thalassospira lucentensis
Pathway
tlu02020
Two-component system
tlu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tlu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
R1T41_12275
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
R1T41_12275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
tlu02022
]
R1T41_12275
02035 Bacterial motility proteins [BR:
tlu02035
]
R1T41_12275
Two-component system [BR:
tlu02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
R1T41_12275
Bacterial motility proteins [BR:
tlu02035
]
Flagellar system
Flagellar assembly proteins
Others
R1T41_12275
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Response_reg
AAA_19
AAA_16
AAA_3
AAA
HTH_50
Mg_chelatase
AAA_PrkA
AAA_2
AAA_18
MCM
HTH_Tnp_ISL3
ATPase
TadZ_N
AAA_22
DUF6264
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WOI09307
LinkDB
All DBs
Position
complement(2530999..2532567)
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AA seq
522 aa
AA seq
DB search
MQVLIVGGLGGQIGAASKIAMARGATVQLAESVTTSLNILRAGNRIDLVMADITLDVAAL
IEAMHRERINVPVVACGIGNDVNGAVNAIKAGAQEFIPLPPEADLIAAILEAVTEESHAL
IHRDARMAETLRLAEQVAKSSASILITGESGTGKEIISRFVHRKSNRADKPFVAVNCAAI
PDNLLESELFGHEKGAFTGAQARRIGKFEEANNGTLLLDEISEMDVRLQAKLLRAIQEKE
IDRLGGKSPVKVDVRILATSNRNLEAEVNAGNFREDLYFRLNVVNLDIPSLRERPDDIPV
LAEFFVKKYSEANDVPIRPISPLAIARLRSHHWRGNVRELENTMHRAVLIAGPTEIGPEA
IMLSGAGSSEPGWQSAPTPEAAPAQTSAPAPAQPAPSAPSRASSAYANANAAYGGAAYRP
VPPAPQPHHHEDYASPCPAEPVDHDVGSTDQTYGDSSVTAALVGRTVADVERDLIIDTLK
HCFGNRTHAANILGISIRTLRNKLRQYTDEGLAVPQPGNGQD
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtattgatcgttggtggactgggcggtcagatcggcgcagccagcaagatcgcg
atggcacgcggcgcaacagtccagttggccgaaagtgtcacgacatcgctgaatatcctg
cgcgcaggcaaccgtattgatctggtcatggccgacatcacccttgatgtcgccgccctg
attgaggcaatgcaccgtgaacgcatcaatgttccggtggtggcctgcggtatcggaaat
gacgtcaatggtgcggtcaatgcgatcaaggctggtgcacaggaattcatcccgctgcca
cccgaagccgatctgattgccgccatcctcgaagccgttaccgaagaaagccatgccctg
atccatcgcgatgcccgcatggccgaaaccctgcgtcttgccgaacaggtcgccaaaagc
agcgcatccatcctgatcacaggcgaaagcggaaccggcaaggaaatcatctcgcgcttc
gtacatcgaaaatccaaccgcgccgataaaccgttcgtcgcggtcaactgtgcggccatt
cccgataaccttctggaatccgaattattcggccatgaaaaaggtgcctttaccggcgca
caggcccggcgtatcggcaagttcgaagaagccaataacggtacccttttgcttgatgaa
atcagcgaaatggatgtccgccttcaggcaaaactgttgcgcgccattcaggaaaaggaa
atcgaccgtttgggcggtaaaagcccggtcaaggtcgatgtccgtattctggcaacctcg
aaccgcaatcttgaggccgaagtcaatgccggcaatttccgcgaggatttgtatttccga
ctgaacgtcgtcaatcttgatattccctcgctgcgcgagcggcccgacgatattccggtt
ctggcggaattctttgtgaaaaaatattccgaagccaatgacgtgccgatccgaccgatc
agcccgctggcaatcgcacgtttgcgcagccaccattggcgcggcaacgttcgagaactg
gaaaacaccatgcatcgcgcggtcctgattgccggtccaaccgaaatcggccccgaagcc
atcatgctttccggcgcgggtagcagcgaaccgggctggcaatcagctccgacacccgaa
gcagcgcccgcgcagacatctgcacctgccccggcccaaccggcaccaagtgccccgtca
cgcgcaagttcggcctatgcaaatgccaacgcagcttatggtggtgccgcctatcgtccg
gttccgcctgcgccgcagcctcatcatcacgaagattacgcatcgccctgcccggctgag
cctgtcgatcatgatgtcggttccacagatcaaacctacggagactcttcggtaaccgcg
gcactggtcggccgaactgttgccgatgtcgaacgcgatctgattattgatacactgaaa
cattgctttggtaaccgcacccatgcggccaacattctgggcatttcgatccgcacgcta
cgcaacaaactgcgtcagtataccgacgaaggccttgccgtgccgcaacccggtaatggc
caggactga
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