Thalassospira lucentensis: R1T41_13535
Help
Entry
R1T41_13535 CDS
T09476
Name
(GenBank) autotransporter domain-containing protein
Organism
tlu
Thalassospira lucentensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
WOI09553
LinkDB
All DBs
Position
complement(2796621..2800283)
Genome browser
AA seq
1220 aa
AA seq
DB search
MDPHQPSRRARQFSCWRGIFAHTRYGLVPLILSCAAPIGSAQAATFNVTNTADSGAGSLR
QAIFDANAAGGTNTIDVQNGLGTITLTSGDLNALNSNITLNGNGNTLSGNNAFRGLFVYS
GTVAINDLTIENAVASGGDAGQAAGGGAGLGGALFVKDGANVTISNLVAQNNAATGGDGG
AQTASGVTGGGGGMGGDGGTVVSGTNGGGGGLGSGATGGSNVGNGGDGIAQGEGAGGDGA
DLGGGGGTGGSNGGGGGSGDQSVGGGGVNGIDGTFTDDPDGGFGGGGGKAGNGGFGGGGG
AFRGDGGFGGGGGGGGLGSVASVGQGGFGAGNGVSSGTTSQAAGGGGLGAGGAIFVMDGA
TLTIAGTLTVNNNTVTGGTGGTGAAGTAEDGSAFGDGVFLQGSGTLTFNPDTGDTQTLAN
TITDQAGSGGTGSWALTKNGAGTLTLSAANSYSGATNLSAGTLSLSGSGTLGDAAGVLNL
TGGTLDLGTTTQTRTGTITLNGATVSNGTLSSSGTFDTQSGTISAVLAGTGALAKTGTGT
VTLSAANTYTGATNLSAGTLSLSGSGTLGNAAGALNLTGGTLDLGTTTQTRTGTITLNGA
TVSNGTLSSSGTFATQSGTISAVLAGTGALAKTGTGTVTLSGANTYSGTTTVSAGRLAVN
GSIASAVTVASGATLGGTGTLGATTLQSGGVHAPGNSIGTQTVNGAYVLNAGSILEIEVD
SAGNSDKVIVTGTVDITGSTLRVKGVSGNNFSGQTTYNYVIIENDGVDAITGDFATIDNQ
LAFYDAARSTVGGTGNDVSLTLTRNASGFTDIATTPNQKAVAGQVGNLSGTDGTTISNAI
LGLTDAGAQHAYQQLSGDIFAAGPTMNDHITHQATGQIGARLADLNRSRGVTGTISGSLV
AASTLSPAELTGFARSGPMASDSEIYASDANMLSLGAENAPQAASAIWLQAIGATGRIDG
DGNADTTDYQWTGMVGGFDTQLSDTTILGVYFGYADARNRQAGRDATLDSRNFMAGLYGT
RDLGDDLRLSGQAGWTRTANDSRRNLVFGGIDRTATADYTDNALNANLELARGFDVAHNW
RVVPYGALGVLWNDHDAFTETGAGSANLSRASDSTLTGTASLGLRMVGMFETGNGKTLIP
QFRLGWDHHLGPTANSTTLAFTGTSSFTVAGSETDRDTLVGNLGMTLADDDGWSFYADYQ
PSISKSRREHAASAGFRMKF
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcatcaaccatcccggcgggcacgtcaattctcgtgctggcgaggtatcttt
gcgcacacccgatatggtcttgtccccctgatcctgtcatgcgccgcaccaatcggatcg
gcacaggccgcaacgttcaatgtcaccaacaccgccgacagcggtgccggttccctgcgg
caggcgatttttgatgccaacgctgcgggcggcaccaacaccatcgatgtccaaaacggt
ctgggcaccatcacgctgaccagcggcgatctgaacgcgttaaacagcaacatcacgctg
aacggtaatggcaatacgctgagtggcaataacgcgtttcgcggcctgtttgtgtattcc
ggcaccgtggccatcaacgacctgaccattgaaaacgccgttgcttcgggcggcgacgca
ggtcaggccgccggcggcggcgccgggcttggcggggcgctgttcgtcaaagatggcgcc
aatgtcaccatcagcaaccttgtcgcgcaaaacaacgccgcaaccggcggtgatggcggt
gcacaaaccgcaagtggggtcaccggcggcggcggcggcatggggggcgatggcggcacg
gttgtcagtggcactaacggcggcggcggcggccttggcagcggagcaaccggtggatca
aatgttggaaatggcggtgacggaatcgcccagggcgaaggtgccggtggggatggcgcc
gatctcggcggcgggggtggtacgggcggcagtaatggcggcggcggcggttctggcgac
cagtcggtcggcggcggcggtgtcaacggcattgatggcacgtttaccgacgaccccgat
ggcggctttggcggcggcggcggcaaagccggcaatggcggttttggcggcgggggtggc
gcattccggggcgatggcggttttggcggcggcggtggtggtggcggccttggcagcgtc
gccagtgtcggtcagggcggatttggcgctggcaacggtgtctcaagcggtaccacctct
caggcggccgggggtggtggccttggtgccgggggtgccatctttgtcatggatggcgca
accctgaccatcgccggaaccctgaccgtcaataacaacaccgtcaccggcggaaccggc
ggaaccggtgcggcgggcacggccgaggacggctctgcctttggcgatggtgttttcctg
caaggcagcggcaccctgaccttcaatcctgataccggcgatacacaaacccttgccaat
accatcaccgatcaggccggatcgggcggcaccggaagctgggcactgaccaaaaacggc
gcaggcaccctgacactcagtgccgccaacagctattccggcgcaacaaacctttcggcg
ggaacattatccctgtcaggatcgggaacactcggggatgccgccggggtgcttaacctc
accggtggaacgcttgatctcggcacgacaacacagacccgcaccggcaccatcacactc
aatggcgcaaccgtgtcaaatggcacattgtcctcatcgggcaccttcgatacccaatca
ggcaccatcagtgccgttctggccgggaccggggcgcttgccaaaaccggcaccggcacc
gtcacactgagtgctgccaacacctataccggcgcaacaaacctttcggcgggcacatta
tccctgtcaggatcgggaacactcggaaatgccgcaggcgcacttaacctgaccggcggc
acgcttgatctcggcacgacaacacagacccgcaccggcaccatcacactcaatggtgca
accgtgtcaaacggcaccctgtcatcatcgggcaccttcgcgacccagtcgggcaccatc
agtgccgttctggccgggaccggcgcgcttgccaaaaccggcaccggcaccgtcacactc
agtggggccaacacctattccggcaccacgaccgtttctgcgggccgccttgcggtcaat
ggatcaattgcctctgccgtcacggtcgcgagcggtgccacccttggcggcaccggcacc
ttaggggcgacgaccttacagtcgggcggcgttcacgcgccgggcaattccatcggcacc
cagaccgtcaatggcgcctatgtcctcaatgccggttccatcctcgagatcgaggtggat
agtgctggcaattccgacaaggtcatcgtgactggcacggtcgatatcaccggctcgaca
ctgcgggtcaaaggcgtatcggggaacaatttctccggtcaaaccacctataattacgta
atcatcgaaaatgatggcgttgatgcgattaccggcgattttgcaacgattgacaatcag
cttgccttttatgacgccgcccgttccaccgtcggcggcaccggcaatgatgtctccctg
acactgacccgcaacgccagtggctttaccgacattgccacaacccccaatcaaaaagcc
gtcgcaggccaggtcggcaacctttcgggcacggacggcaccaccatcagcaacgccatt
ctcggcctgacggatgccggggcgcagcacgcctatcagcagctctcgggcgatatcttt
gccgcgggccccaccatgaatgaccacatcacccatcaggccaccggccagatcggggcg
cgccttgccgatctgaatcgcagccgcggcgttaccggaaccatcagcgggtcccttgtc
gccgccagcaccctgtcccccgccgaacttaccggctttgcccgttccggcccgatggca
agtgacagtgaaatatatgccagtgatgcaaacatgctctcgctgggggctgaaaatgca
ccacaggccgcatccgccatctggcttcaggccatcggcgcaaccggccggatcgatggt
gatggcaatgccgacaccaccgattaccaatggaccggcatggttggcggctttgacaca
cagctttccgataccaccattctgggggtctatttcggttatgccgacgccaggaaccgt
caggctggccgggatgccaccctcgatagccgtaatttcatggccgggctttatggcacg
cgtgaccttggcgatgatttgcggctttccgggcaggccggatggacccgaacggcaaat
gacagccgccgtaatcttgtttttggcggtattgatcgtaccgccacggcggactacacc
gacaatgcgctcaatgccaatcttgaactggcaaggggatttgacgttgcccataactgg
cgggttgtgccctatggcgcgctgggcgtgctctggaacgatcatgacgcctttaccgaa
accggggccggctcggccaatctgtcacgcgcatctgacagcaccctgaccggaaccgca
agcctcgggctaaggatggtgggcatgtttgaaaccggcaatggcaaaaccctgatcccg
caattccggcttggctgggaccatcaccttggcccgacagccaacagcaccacattggcc
tttaccggcacatcctccttcacggtcgcaggcagcgaaaccgaccgcgatacactggtc
ggcaatctcggcatgacccttgccgatgacgatggctggagcttctatgcagattaccag
ccctcaatctccaaaagtcgccgcgaacatgccgccagtgccgggttcagaatgaaattc
tga
DBGET
integrated database retrieval system
