Thalassospira lucentensis: R1T41_13815
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Entry
R1T41_13815 CDS
T09476
Name
(GenBank) PAS domain S-box protein
Organism
tlu
Thalassospira lucentensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_9
PAS
PAS_4
HATPase_c
PAS_8
Response_reg
HisKA
Diguanyl_cycl_sensor
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WOI13177
LinkDB
All DBs
Position
complement(2860711..2864721)
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AA seq
1336 aa
AA seq
DB search
MIWRGGNRHGHRPPYFFDCHPDPMWLFDPEDLHFLAVNPAATSEFGYSHDEFLSMTIADL
RAPEDLPSLTTMIKNIDNGFYYSGRWRLRRKSGDFILTDIRWRIVDFAGKKAVLTSIRDI
TQLEKLEAERELLLHREYEARLGAEIAAHHFKSLSEALPGCFLVLSPEDFVIEAVSDAFL
DTTLTRREDIKGKRVFDVFPDQSPGQPSKHLDDDITSTIQDLTASLERVRNTGLTDILAA
QRYPFNQSANDDDGFRERIWSITNTPVHGPDGAIVFIIHRIEDVTSLIVDDCDAGDKISG
RTIRDFEDHRKVLALDIRLRSRELQLTNERLREQEANLRTAQRLMGLGVWKLDIASGRLT
WSDNVYRICGVRADKFDPVFENYVELVHPDDRPAMVEEYEQFRDGSDPHFIFRHRIVRPD
GQIAHVRGIGERAKTPTGIVLNGVIQDVSDIVAREEDLSQITTLIRIAGRAAKFGGWRVT
LDPPTVTWTGQTARIHDEPKGFSPTFEDAISYYAPEYQPVVRDAFDACIRHGIPFDEVTR
LVTAKGRNLWVRSIGEPEYNDANKVIAVRGAFQDISDVIVARDQTDRLSRQLAETLEHIS
DAFFTVDHEWRLSFMNGQAEKFLERRRDELTGKNIWEAFPEAKGTRFQEEYENAVATRKT
SHFSEYYAPLRKWFDISAYPTPDGLAIYFRDTTTKRARNEQLRLLETAVSHLNDILLITE
AEPVEGPDGPKIVYVNDAFVKRTGFTRDEAIGKTPRILQGPKTQRDELDRIGNALRHWQP
VHAELINYTKSDEPFWLELDIVPLEDDHGIYTHWVAVERDITERRNAERELRLNEQRFRL
VSQATNDVIWDWDLETNHIWWNDGLRTLFGYDPEKMETGLESWTKQIHPDDLERVLTSIK
AVINGTGNKWQDEYRLVRADGTIRHVADRGFVIRNSRDKAVRMLGSVMDVTSQREIEMRL
RQSQKLEAIGQLTGGIAHDFNNLLTVILGNAEMLAEQLTDPKLRALADISIGAAERGAEL
TNRLLAFARRQALKPERIDIGTHIDGLEPLLRRTLNENIDLEIVHKQHVWTAEIDPSLLE
TAVINLVINARDAMPDGGRLIIETGTITFDKDYLTANSDIMPGDYVTISVSDNGTGMSDD
VVANAFEPFFTTKEVGKGSGLGLSMVYGFVRQSGGHAKIYSEPGKGTTIRLYFPRVDDLP
SPAGKSRKIPTITGGDEHILIVEDDALVRENAVAMLRELGYRISFAENSERALDLLARYN
DIALLFTDMVMPGSMDGLKLAEIATLLKPDLSVLYTSGYSESLIIRDGRFEKKVHMIGKP
YRRQELAQKIRELLDQ
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atcatatggcgagggggtaaccgccatggacaccgaccgccatattttttcgactgccac
cccgatcctatgtggttgttcgaccccgaagatctgcattttcttgctgtcaatcctgca
gcaacgagtgaatttggctattcacacgatgaattcctatcaatgactatcgccgatctt
cgtgcgccggaagatttgccttcccttacaacaatgatcaaaaatattgacaacggcttt
tattatagcgggcgttggcggttgcgccgcaaatcaggcgatttcatactaaccgatatc
cgttggcgtattgtggactttgccggaaagaaagccgtcctgacatcaatccgcgatatc
acgcagcttgagaagcttgaagcggaacgagaacttctattgcatcgtgaatatgaagcc
cggcttggcgcggaaatcgccgctcatcacttcaaatcgctgtctgaagcgctgcctgga
tgtttccttgttttatcgccagaagattttgtcatcgaggccgtcagcgatgcgtttctt
gataccaccttgacccgacgcgaagacatcaagggaaaaagggttttcgacgttttcccc
gaccaatcccccgggcaaccctcgaagcatctcgacgacgatatcaccagtaccatacag
gacctgaccgcttcgctggaacgtgtccgcaatacaggtttgaccgatattctcgcagca
cagcgttaccctttcaaccagtcagcaaacgacgacgacggcttcagggaacggatttgg
tcaataacaaacacaccggttcacggccccgatggggccatcgtcttcatcattcatcgt
atagaagatgtcaccagtctgatcgtcgacgattgcgatgcaggcgataaaatttctggc
aggaccattcgcgatttcgaggatcatcgcaaggtccttgcgcttgacatacgattacgg
tcacgcgaattgcagctcaccaacgaaagactgcgagaacaggaagccaatcttcgcact
gcacaaagattgatggggctgggcgtctggaagcttgatatcgccagtggccgtctgaca
tggtccgacaacgtataccgcatctgcggtgttcgggcggacaaattcgatcccgttttc
gaaaactatgttgaactggttcatcccgatgaccggcctgcaatggttgaggaatatgaa
cagtttcgggacggcagcgacccgcatttcattttccgtcacaggatcgttcgacccgat
gggcaaatcgcacatgtacgcgggatcggggaacgagcaaaaacaccgacgggcatcgtt
ttgaacggggtgatacaggatgtcagcgacatcgttgcccgcgaagaagacctttcacaa
attaccacgctcatacgtattgcgggaagagccgcgaaattcgggggatggcgggtcacc
cttgacccacccaccgtaacatggaccggtcaaacagcgagaattcatgacgagccgaag
ggtttttcaccaacatttgaagatgcaatttcctattacgcaccggaatatcaacctgtc
gtccgggacgctttcgacgcctgcatccggcacggcatcccgtttgacgaagttacccgc
cttgtaacggcaaagggcagaaacctttgggtacgctcgattggcgaacccgaatacaat
gatgccaataaagtcattgctgttcgcggggcttttcaggatatctccgatgttatcgtt
gcccgcgaccaaaccgacagactgtcgcgccagcttgccgaaactcttgaacatatcagc
gatgctttttttactgtcgatcatgaatggcggttaagtttcatgaacggacaggccgaa
aaatttctggaacgccgccgggatgaactgactggcaaaaatatctgggaggcatttccc
gaagcgaaaggaacccggtttcaggaagaatatgaaaacgccgtcgccaccagaaaaaca
tcccatttcagcgaatactatgcaccgctgcggaaatggttcgacattagcgcctacccg
acgccagatggccttgcgatctatttccgggatacgacgaccaaacgcgcgcgaaatgaa
caacttcgcctgcttgaaacagcagtatcacatctgaacgatatattgctgattaccgaa
gcagaaccggtcgagggtcctgacgggccgaaaatcgtttatgtcaacgacgcctttgtc
aaacgaaccggctttacccgcgacgaggccataggcaaaacaccgcgtattctgcaaggc
cccaaaacccagcgcgacgaactggaccggatcggtaatgccctgcgccactggcagccc
gttcatgcagagctgatcaattataccaaatcggacgaaccattctggctggagcttgat
atcgtccctctggaggatgatcacggcatctatacccattgggttgcagttgaacgcgac
atcaccgagaggcgaaatgccgagcgcgagttgcgcctgaacgaacagcgttttcggttg
gtatcgcaggctaccaatgacgttatctgggactgggaccttgaaaccaatcacatctgg
tggaatgacggacttagaaccctgtttggttacgaccctgaaaaaatggaaacgggtctg
gaatcctggaccaaacaaatccatcccgacgaccttgagcgggttctgaccagcataaag
gccgtcatcaacggaacaggcaacaaatggcaggacgaatatcgtctggtacgggcagac
ggaacaatacgccatgttgccgatcgcggatttgtcatacgtaacagtcgtgacaaggcg
gttcgcatgctgggcagtgtcatggatgtaacgtcgcaacgtgaaatcgaaatgcgcctt
cggcagtcacagaaacttgaagcaatcgggcagcttaccggcgggattgctcatgatttc
aataaccttctgactgttatccttggcaatgcagaaatgctcgcagaacaactgaccgac
ccgaagctgcgtgctcttgccgatatcagtatcggtgctgctgaacgcggcgcagaactg
accaatcggctgcttgcttttgcacgccgtcaggcactgaaaccggaacggatcgatatc
ggcacgcatattgacggtctcgaacctttgctgcgaagaacgttaaatgaaaatatcgat
cttgaaatcgttcataaacaacatgtctggaccgctgaaatagatcccagccttcttgaa
accgctgtaatcaatcttgtcatcaacgcacgcgatgcaatgcccgacggcggcaggctg
atcattgaaaccgggacgatcacatttgataaagattatctcacggccaattccgatata
atgccgggtgactatgtcacgatttcagtttcggataacggtacaggaatgtctgatgac
gtcgtggcaaatgccttcgagcccttctttaccaccaaagaagtcggcaaaggcagcggg
cttgggctaagcatggtttatggttttgtccggcaatcaggcgggcatgcgaaaatctat
tccgaacccggaaaaggaacgaccatccgcctttattttccacgtgtagacgatctgccg
tcacccgcaggaaaatcacgtaaaatcccaactattaccggtggcgacgaacatatcctg
atcgtagaggacgatgcactagtacgggaaaatgccgttgcaatgctgcgtgaacttggc
taccggatcagctttgcggaaaacagcgaacgcgcacttgatcttttggcccgatataac
gatatcgccctgctttttacagatatggtcatgcccggcagtatggacggactcaaactc
gccgaaattgccaccctgctcaaaccggatctgtccgttctttacacatcaggctacagc
gaaagtctgatcattcgcgacgggcgatttgaaaagaaggttcatatgatcggaaaaccc
tatcgacgtcaggaactggcacagaaaatccgcgaactgcttgatcaatag
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