Thalassospira lucentensis: R1T41_14705
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Entry
R1T41_14705 CDS
T09476
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tlu
Thalassospira lucentensis
Pathway
tlu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tlu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R1T41_14705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tlu03021
]
R1T41_14705
03400 DNA repair and recombination proteins [BR:
tlu03400
]
R1T41_14705
Enzymes [BR:
tlu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R1T41_14705
Transcription machinery [BR:
tlu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R1T41_14705
DNA repair and recombination proteins [BR:
tlu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R1T41_14705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
WOI09772
LinkDB
All DBs
Position
3032088..3033104
Genome browser
AA seq
338 aa
AA seq
DB search
MIQKNWQELIKPTKLDVTPGTDASRIGTIVAEPLERGFGQTLGNALRRILLSSLQGSAVT
AIQIDGVLHEFSSIPGVREDVTDIILNIKTMGVRMHAEGPKKMALKATGPGAVTAGQIET
GADIEILNPDLELCHLDDGATLNIEFTVDNGKGYVAATSHRSSDAPIGLIPIDAIFSPIR
KVAYKVENTRVGQDTDYDKLSLTVETNGSVTPEDAMALAARILQDQLSLFVNFDEPEAVV
EEKKEDELPFNRNLLRKVDELELSVRSANCLKNDNIIYIGDLVQKTEAEMLRTPNFGRKS
LNEIKDVLAQMGLHLGMEVGGWPPENIEELARKFEDPF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgattcaaaagaactggcaggaactgattaagccgaccaagcttgatgttactccgggt
acggatgccagccgcatcggtacgatcgtggcggaaccgctggagcgcggttttggtcag
actctgggtaacgcgctgcgtcgcattctgctgtcgtcgctccagggttcggcggttact
gcgatccagatcgacggtgtattgcacgaattttcgtcgatcccgggcgtgcgtgaagat
gtcaccgacatcatcctgaatatcaagaccatgggtgtgcgcatgcatgccgaaggtccg
aagaaaatggcgcttaaagcgaccggtccgggtgctgtcaccgcgggtcagatcgaaacc
ggtgccgacatcgaaatccttaacccggatctcgagctgtgccatcttgatgatggtgcg
acgctgaacatcgaattcaccgttgataacggtaaaggctatgttgctgcgacctcgcat
cgttcgtcggatgcgccgatcggtcttattccgattgatgcaatcttcagcccgatccgt
aaagtggcctacaaggtggaaaacacccgtgttggtcaggataccgattatgacaagctg
tcgctgaccgttgaaaccaacggctcggtcaccccggaagatgcaatggcacttgctgcc
cgtatccttcaggaccagctgtcgctgttcgtcaacttcgacgagccggaagcggttgtc
gaagagaagaaagaagacgaactgccgttcaaccgcaatctgctgcgcaaggtcgacgag
ctcgagctgtcggtccgttcggcaaactgcctcaagaacgacaacatcatctatatcggt
gatctggttcagaaaaccgaagcagaaatgcttcgtacgccgaacttcggtcgtaagtcg
ctgaacgaaatcaaggatgttctggctcagatgggtctgcatcttggtatggaagtcggc
ggttggccgccggaaaatatcgaagaactcgctcgcaagttcgaagacccgttctaa
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