Thalassospira lucentensis: R1T41_15100
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Entry
R1T41_15100 CDS
T09476
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tlu
Thalassospira lucentensis
Brite
KEGG Orthology (KO) [BR:
tlu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tlu03016
]
R1T41_15100 (rnd)
Enzymes [BR:
tlu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
R1T41_15100 (rnd)
Transfer RNA biogenesis [BR:
tlu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
R1T41_15100 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
WOI09850
LinkDB
All DBs
Position
3110765..3111934
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AA seq
389 aa
AA seq
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MEPITNTEELRALCEKLRQFEYVTVDTEFMRDSTYWPQLCLVQLASPEASDNGAAVDPLA
EGIDLAPLFDLMQDESVVKVFHAARQDIEIFVHLSGKVPHPVFDTQVAAMVLGYGDQVGY
ETLVNKVVRKNIDKSMRFTDWSHRPLSTKQLSYALSDVTHLRVIYEAFHERLEANGRAYW
LAEEMERLTDPSIYSIDPKEAWLRLKTRSNSPKFLAVARALGEWRETEAQRKNLPRNRVL
RDDTLLDIAARQPLTDKDLDKTRGVGRNFGSSKPGQAIIEAIQAALDSPQEDWPQPKLRP
DLPAGIGPTVELLKVLLKLCSEEKGVAQRLVASSDDLQNIAADDNADVPAMHGWRRELFG
QYALQLKHGQIGLKLKNGEVVFVELEAQD
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaattacaaatacagaagaactgcgcgcgttgtgcgaaaagctccggcagttc
gaatatgtcacggtcgataccgagttcatgcgcgattcgacctattggccgcagctttgc
cttgtgcagttggcaagccccgaagcatccgataatggtgcggcggttgatccgctggcc
gagggcattgaccttgccccgttgttcgacctgatgcaggacgaaagcgtggtcaaggtg
tttcacgccgcccgtcaggatatcgagatttttgtccatctcagcggcaaggtcccgcac
ccggtattcgatacccaggtggcggcgatggtgctgggctatggtgatcaggtcggctac
gagacgctggtcaacaaggtggtgcgcaagaatatcgataaatcgatgcgctttaccgac
tggtcgcaccgtccgctttcgaccaaacagcttagttatgcgctgtcggatgtgacgcat
ctgcgcgtgatctatgaagccttccacgaacggctcgaagccaatggtcgtgcctattgg
ctggccgaggaaatggaacgcctgaccgatccgtcgatctattcgattgatccgaaagaa
gcatggctgcggcttaaaacccgctccaacagcccgaaattcctggcggtggcgcgcgcg
cttggcgaatggcgcgagaccgaggcacaacgcaagaacctgccgcgtaaccgcgttctg
cgtgatgacacgctgcttgatattgctgcccggcagccattgaccgacaaggatctcgac
aagacccgcggtgttggtcgcaatttcggcagcagcaaacccggtcaggccatcatcgaa
gccatccaggctgcccttgatagcccgcaggaagactggccgcagccaaaactccgcccg
gaccttcccgccgggatcggcccgacggtggagctgcttaaggtgctgctaaagctctgt
tccgaggaaaagggcgttgcccagcgccttgtggcgtccagcgatgatttgcagaatatt
gccgccgatgacaatgccgacgtcccggcaatgcatggctggcggcgcgagctgttcggc
caatatgccctgcaactcaagcacggacagatcgggctcaagctcaagaacggcgaagtg
gtatttgtcgagcttgaagctcaggactaa
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