Thalassospira lucentensis: R1T41_16530
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Entry
R1T41_16530 CDS
T09476
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tlu
Thalassospira lucentensis
Pathway
tlu03410
Base excision repair
tlu03430
Mismatch repair
tlu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R1T41_16530 (recJ)
03430 Mismatch repair
R1T41_16530 (recJ)
03440 Homologous recombination
R1T41_16530 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlu03400
]
R1T41_16530 (recJ)
DNA repair and recombination proteins [BR:
tlu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
R1T41_16530 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
R1T41_16530 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
R1T41_16530 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
WOI10125
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Position
3410556..3412352
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AA seq
598 aa
AA seq
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MTDHAQEKTFLGIERSVTGKWWRERNLDDRLAITIAQRFGVPEVVGRVMAARDIGLDDAE
SFLNPTLRDLMPDPSTLKDMDKAASRIADAVIKGENIAIFGDYDVDGATSTALLKRLFAA
LGRDVVVHIPDRQKEGYGPNSPALLDLQRRGANLILTVDCGVTAYAPLTDAREAGIEIIV
VDHHAAEPELPPAVAVVNPNRLDDESGLGHLCAAGVAFLLSVAILRELRSRGWLEQSGIR
PPDLRNWLDLVALGTVCDVVPLRGLNRAFVTQGIKIMRHRHNIGMAALADIAGVNETPSA
YHLGFMLGPRVNAGGRVGESFLGTTLLSGDDPVQALDIARKLDEYNRERKAIEDIVLDQA
ISAVESQSKVGAMVLVGGEDWHPGVIGIVASRLKDRYHVPALVMGMVDGVFKGSARSVRG
IDLGAAIIAARQAGLLINGGGHGMAAGFTLDPEKRDAFEEFLETRFARIIAENDIRPTMT
VDGGLHAMGATVDLIEALEKLGPFGAGNAEPRFVFPECRVVKADVVGADHVRCILSGSNG
KGRLKAIAFRCLDNDMGQTLLKHGGRPLHILGHLRRDSWQGREGVQLMIDDVALPVLE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcatgcgcaagaaaagacatttttggggatagagcgatccgttaccggtaaa
tggtggcgtgaacgcaatctggatgaccggctggcaatcaccattgcccagcgttttggc
gttcccgaagtcgtcgggcgtgttatggccgcccgcgatatcgggctggatgatgccgaa
agtttcctgaacccgaccctgcgcgatctgatgcccgatccatcgaccttaaaggacatg
gacaaggcggcatcgcgcattgccgatgcagtgatcaagggtgaaaatattgcgatattt
ggtgattatgatgttgatggtgcgaccagcactgcgttgttaaagcgcctgttcgcggcc
cttgggcgcgatgtggtggttcatatcccggaccgacagaaggaaggatatggccccaat
agtccggccttgctcgatttgcagcgccggggggccaatctgatcctgacggtcgattgc
ggggtgacggcctatgcgccgctgaccgatgccagggaagccgggatcgagatcattgtc
gttgatcaccatgctgccgagccggaattaccgcccgccgttgcggtcgtgaacccgaac
cgccttgatgatgaaagcggccttgggcatttgtgtgccgcaggtgttgcctttttgctg
tcggttgcgatcctgcgcgaattgcggtcgcgcggctggctggaacagtcgggcatccgt
ccgccagatttgcgcaactggcttgatcttgtggcacttggcactgtctgtgatgtggtg
ccgttgcgcggactcaaccgtgctttcgtgacacagggcatcaaaatcatgcgccatcgc
cacaatatcggtatggctgcattggccgatattgccggggtcaatgaaacgccgagtgcc
tatcatcttggcttcatgctggggccgcgggtgaatgccggtgggcgcgtcggggaatcg
ttccttgggacgacgttgctttcgggtgatgatccggtgcaggcgctcgatatcgcgcgc
aagcttgatgaatataaccgtgaacgcaaggcgatcgaggatatcgtgcttgatcaggcg
atcagcgcggttgaaagccaatcaaaggtcggtgcaatggtgctggtcggtggggaggac
tggcatcctggtgtgatcggtattgtcgcaagccgtttgaaggatcgttatcatgttccc
gcccttgtgatgggcatggttgatggcgtgttcaagggatcggcgcgttcggtgcgtgga
attgaccttggggctgcgatcattgccgcacgtcaggcgggtcttctgatcaatggtggc
gggcatggtatggcagcaggcttcacccttgatccggaaaaacgcgatgcgttcgaggaa
tttcttgaaacccggtttgccagaatcatcgctgaaaatgatattcgcccgaccatgacg
gttgatggcggattgcacgcgatgggcgcgacggttgatctgatcgaggccctagaaaaa
cttggcccgtttggcgctggcaatgccgaaccgcgctttgttttcccggaatgccgggtg
gtcaaggccgacgtggtgggcgctgatcacgtgcgctgtattttatcgggaagcaacggc
aaggggcggctcaaggccatcgcattccgttgccttgataatgatatgggccagaccctt
ctgaagcacggtgggcgtcccctgcatatccttggacatttgcggcgcgatagctggcag
gggcgcgaaggtgtgcagcttatgatcgatgatgttgcattacccgttttggagtag
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