Thalassospira lucentensis: R1T41_16855
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Entry
R1T41_16855 CDS
T09476
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
tlu
Thalassospira lucentensis
Pathway
tlu00521
Streptomycin biosynthesis
tlu00523
Polyketide sugar unit biosynthesis
tlu00525
Acarbose and validamycin biosynthesis
tlu00541
Biosynthesis of various nucleotide sugars
tlu01100
Metabolic pathways
tlu01110
Biosynthesis of secondary metabolites
tlu01250
Biosynthesis of nucleotide sugars
Module
tlu_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
tlu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
R1T41_16855 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
R1T41_16855 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
R1T41_16855 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
R1T41_16855 (rfbB)
00525 Acarbose and validamycin biosynthesis
R1T41_16855 (rfbB)
Enzymes [BR:
tlu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
R1T41_16855 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
WOI13186
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Position
3471090..3472145
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AA seq
351 aa
AA seq
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MRVMVTGGAGFIGSALCRYLVLERGWEVLNLDKLTYASDLRSLDTIDHLPNYQFIKADIA
DPLAVAAALHDFGPDAVMHLAAESHVDRSIDGPGTFINTNVVGTYHLLEAVAVYWRGLSP
DDRERFRFHHISTDEVYGSLGPDDGLFTEQSPYRPNSPYAASKASSDHLVRAWCHTYGLP
VVISNCSNNYGPFQFPEKFIPLMTINALRGRKLPVYGDGRNIRDWLHVDDHARALALIVE
QGRVGETYNVGGRNEARNIDMVRQIFDLVCELAEDVPITKFDDIVEFVTDRPGHDHRYAI
DATKIETELGWKATHDIASGLRETVKWYIDNRDWWQAILDHEYDLQRLGQG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcatggtgactggcggggcgggatttatcggatcagccctgtgtcgttatctg
gttcttgaacgtggctgggaagtacttaaccttgacaaactgacctatgccagcgatctg
cgcagtcttgataccatcgatcatctgccgaattatcaattcatcaaggccgacattgcc
gatccgcttgcggttgcggcggcccttcatgatttcggcccggatgcggtcatgcatctg
gcggcggaaagccatgtggaccggtcgattgacgggccggggacgtttatcaacaccaat
gttgtcgggacctatcacttgcttgaagcggtggccgtttactggcgcggcctttcgccg
gatgatcgggaacggttccggttccatcacatatcgaccgacgaggtttacggatcgctt
ggccccgatgatgggctgtttaccgaacaaagtccgtatcggcccaattccccctatgcc
gcaagcaaggcatcatcggatcatctggtgcgggcgtggtgccatacctatggcctgccg
gtggtgatcagcaattgttcgaacaattatggtccgttccagtttccggaaaaattcatt
ccgctgatgaccatcaatgccctgcgtggcaggaagttgccggtttatggcgatggccgc
aatatccgcgactggctgcatgttgatgatcatgcccgtgcgctggcgttgattgtcgag
cagggccgggtcggggaaacctataatgtcggcgggcggaacgaggcgcgcaatatcgat
atggtgcgccagatattcgatctggtatgtgaactggccgaggatgtgccgatcacgaaa
ttcgatgatattgttgaattcgtcaccgaccgtccggggcatgatcatcgttatgcgatt
gatgcgacgaagatcgagaccgagcttggctggaaggcgacgcatgatatcgcatcgggc
ctgcgcgagacggtgaaatggtatatcgacaatcgcgactggtggcaggcgattcttgat
catgaatatgatctgcaacggctggggcagggctga
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