Thalassospira lucentensis: R1T41_17095
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Entry
R1T41_17095 CDS
T09476
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
tlu
Thalassospira lucentensis
Brite
KEGG Orthology (KO) [BR:
tlu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tlu03021
]
R1T41_17095 (rpoH)
Transcription machinery [BR:
tlu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
R1T41_17095 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
TPD
Motif
Other DBs
NCBI-ProteinID:
WOI10232
LinkDB
All DBs
Position
complement(3527005..3527871)
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AA seq
288 aa
AA seq
DB search
MKQGNALPIISQDGLTVYLQRIRRYPMLTPEQETTFACEYRDNDDATAAEKLITSHLRLV
AKIAMSYRGYGLPINELISEGNVGLLQSVKRFDPDKGFRLATYAMWWIRAAIQEYILHSW
SLVKMGTTAAQKKLFFNLRKLKSQMQAIDEGDLLPEQVELIATKLNVSEDDVIMMNRRLA
GPDHSLNAPVRIDGDGEWVDWIESEDEDQETLYGKREEFLQRMNLLKSAMSHLNARERDI
LTQRRLLDSPVTLENLSVAYGISRERIRQIEVRAFEKVRKSIHTDLPM
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagggaaatgcacttccaatcatctcccaagatggtctgacagtctatttgcag
cgcatccgccgttaccccatgcttacacctgaacaggaaacgacgtttgcgtgtgaatac
cgtgacaatgatgatgcaactgccgcagaaaagctgattaccagccatttgcgactggtt
gccaagatagccatgagctatcgcggttatggacttccgataaacgaattgatctccgaa
ggcaatgtaggcctgcttcaatcggtcaagcgatttgacccggacaaagggttccgcctt
gcgacttacgcaatgtggtggatccgcgccgcaatacaggaatacatcctgcattcctgg
tcgctggtgaaaatgggcacgaccgccgcccagaaaaagcttttctttaatctgcggaaa
ctcaaaagccagatgcaggcaatcgatgaaggcgatctgctaccggagcaggtggaactg
atcgcgacaaagctgaacgtttccgaagatgacgtgatcatgatgaaccgccgcctcgcc
ggaccggatcattctctgaatgcgccggtacgcattgacggcgacggcgaatgggtcgac
tggatcgaaagcgaagacgaagatcaggaaaccctgtatggcaagcgcgaggaattcctt
caaaggatgaacctgctgaaaagtgcgatgtcgcatcttaacgcacgcgaacgcgacatt
ctcacccagcgtcgccttctggactctccggtgacgctcgaaaatctcagcgtggcatat
ggaatttctcgtgaacgcattcgccagatagaagtacgtgcctttgaaaaagtgcgcaaa
tcgatccacaccgatttgccgatgtga
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