Thalassospira lucentensis: R1T41_17190
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Entry
R1T41_17190 CDS
T09476
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
tlu
Thalassospira lucentensis
Pathway
tlu00521
Streptomycin biosynthesis
tlu00523
Polyketide sugar unit biosynthesis
tlu00541
Biosynthesis of various nucleotide sugars
tlu01100
Metabolic pathways
tlu01110
Biosynthesis of secondary metabolites
tlu01250
Biosynthesis of nucleotide sugars
Module
tlu_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
tlu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
R1T41_17190 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
R1T41_17190 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
R1T41_17190 (rfbC)
Enzymes [BR:
tlu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
R1T41_17190 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
WOI10251
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Position
3550148..3550771
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AA seq
207 aa
AA seq
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MEFDRFDIDGPVLFVPNRHRDPRGTFAETFREDEFRAAIGDVTLVQENQSISKPVNTIRG
LHYQSEPRAQGKLVRVTTGAIMDIAVDLRPHSQTFGQHIKIELSEENWYQLWIPPGFAHG
FRTMRPDTTVIYKVSDYYSPEHDRGIAWNDPDLHIDWELYGQQPVLSEKDKDQPALVELF
SIDVARAAEANRAMVHGIGRYRASTGD
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgatcgctttgatattgacgggccggtgctgtttgtaccgaaccgtcatcgt
gatccgcgcgggacatttgccgagacctttcgcgaggatgaatttcgtgcggcaattggc
gatgtgacattggtgcaggaaaaccagtcgatcagcaaaccggtcaacaccattcggggc
ttgcattatcaatccgaaccgcgcgcgcaagggaaactggtgcgcgtgaccaccggagcg
atcatggatatcgctgttgatctgcgcccgcattcacagacattcggtcagcatatcaag
atcgagctgtccgaagaaaactggtatcagctatggatcccgccgggatttgcgcatggt
tttcgcacgatgcgtcccgatacgaccgtgatttacaaggtatcggattattacagtccc
gagcatgatcgcgggatcgcctggaatgaccctgatcttcacattgactgggaactgtac
gggcaacagccggtattatcggaaaaggacaaagatcaaccagcactggtcgagctgttt
tcgatagatgttgcccgggctgcggaggcgaaccgggcgatggtgcatggtatagggcgt
tatcgggcttcgacgggcgactga
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