KEGG   Thalassospira lucentensis: R1T41_18425
Entry
R1T41_18425       CDS       T09476                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
tlu  Thalassospira lucentensis
Pathway
tlu02020  Two-component system
Brite
KEGG Orthology (KO) [BR:tlu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    R1T41_18425
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:tlu02022]
    R1T41_18425
Two-component system [BR:tlu02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   R1T41_18425
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_16 AAA_5 Mg_chelatase AAA B12-binding NB-ARC FleQ AAA_19 BrxC_BrxD TIP49 AAA_2 RNA12 VpsR MCM
Other DBs
NCBI-ProteinID: WOI10481
LinkDB
Position
complement(3810866..3812251)
AA seq 461 aa
MAHDILIVDDEEDIRALIAGILEDEGHKTRQAGSSQEALSEVAARRPSLVILDIWMDESD
HDGIETLKLIKREHSEVPVVMISGHGNIETALEASRNGAYDFIEKPFNTDRLLLVVERAI
DDARLRRENRELTMRAGGDTELVGCSSVINGLRQAIDRVARTGSRILISGPAGSGKEVVA
RLIHKNSARAEAPFVVLNCANISPGTMEESLFGAVAAANREARTGVLELAHGGTLLLDEV
ADMPLETQGKIVRVLQEQTFERVGGSVPVSVDVRVIATTARDLEERIAEQRFRQDLYYRL
NVVPLQVPSLQQRRDDIPDLAEWFLVRYAEATGLPKRKLSAEALAALHSYDWPGNVRQLR
NVIERLMIMMAPDDSTDVISGKMLPSELFEDVPVSLNFDKTSEIMALPLREAREMFEKEY
LQTQVERFGGNISKTASFVGMERSALHRKLKSLGVNGERAE
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggcgcacgatattctgatcgtcgatgatgaagaagatatccgggcactgatcgccgga
atcctcgaagacgaagggcacaaaacccgacaggcaggttcaagccaggaagcgttgtca
gaggttgccgcacggcggccgagtctggtgattcttgatatctggatggacgaaagcgat
cacgatggtatcgagactctgaaactgatcaagcgtgaacatagtgaagtgcctgtcgtc
atgatttcgggacatggcaacatcgaaacggcactggaagcgtcacgtaacggtgcatat
gatttcattgagaagccattcaatacggatcggctgttgctggtcgtcgaacgcgcaatc
gacgatgcccgcctgcgccgggagaaccgcgaactgaccatgcgggcagggggagacacc
gaactggttggttgttcttctgtcattaatggattgcgccaggcgattgaccgtgtggcc
cgcactggaagccgaattttgatttcgggcccggcgggttcgggaaaggaagtcgttgcg
cgtctgatccacaaaaattctgcccgtgccgaagcaccttttgttgttttgaattgcgcg
aatatttcgcccggtacaatggaagaatcactgtttggtgccgtcgctgcggccaatcgg
gaagcacgtacaggtgtgctggaactcgcacatggtggaaccttgctgcttgatgaagtg
gcagatatgccattggaaacgcagggtaaaatcgttcgcgttctgcaggagcagacattc
gagcgcgtcggtggctctgtgcccgttagcgtggatgtacgcgttattgcaacaaccgcg
cgagatctggaagaaaggattgcggagcagcggtttcgtcaggacttgtactatcgcctg
aatgtcgtgccgttgcaggttccgtccctgcagcagcgtcgtgacgatatccctgacctc
gcagaatggtttcttgtacgctatgcagaggcaaccgggctcccaaaacgcaagctttcc
gcagaagcactcgccgcattgcattcatacgactggcccgggaatgttcggcaattgcgc
aacgtaatcgaacgtctgatgatcatgatggcaccagatgacagtacggatgtcatcagt
ggcaaaatgctgccatctgagttgtttgaagatgttccggtatctttgaattttgataaa
accagtgaaatcatggcattgcctctacgcgaagcccgcgagatgttcgaaaaggaatat
cttcaaacgcaggtggaacgttttggcgggaatatttccaaaactgcaagctttgtcggt
atggaacgttctgccttgcatcgaaaactcaaaagtctgggcgtgaatggggagcgtgcg
gaataa

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