Thalassospira lucentensis: R1T41_19055
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Entry
R1T41_19055 CDS
T09476
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tlu
Thalassospira lucentensis
Pathway
tlu03030
DNA replication
tlu03430
Mismatch repair
tlu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R1T41_19055 (dnaE)
03430 Mismatch repair
R1T41_19055 (dnaE)
03440 Homologous recombination
R1T41_19055 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tlu03032
]
R1T41_19055 (dnaE)
03400 DNA repair and recombination proteins [BR:
tlu03400
]
R1T41_19055 (dnaE)
Enzymes [BR:
tlu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R1T41_19055 (dnaE)
DNA replication proteins [BR:
tlu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R1T41_19055 (dnaE)
DNA repair and recombination proteins [BR:
tlu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R1T41_19055 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
Motif
Other DBs
NCBI-ProteinID:
WOI10603
LinkDB
All DBs
Position
complement(3936942..3940427)
Genome browser
AA seq
1161 aa
AA seq
DB search
MENGFVHLRVHTNYSLAEGAITTKELAKMCEADGQPAVAMTDSDNMFGALDFSGVMSGAG
VQPILGVQIGVERFGDQPVVGRISREPNPDKLVLIAKNERGYFNLLKIVSRAHMTSEAGS
EPKALYDHIEQYSSDIICLTGGPTGPLARLIAEGQLEAATECLNKLSGIFGNRLYIELQR
HGEPIEEKVEPGLIKLAYDHNIPLVATNDCFFPKAEMYEAHDVFICIGQGAVVGQEDRWR
LTPEHRFKTADEMRELFADIPEACDNTLTIAKRCSWHVEKIDPILPPFDCGEGRTEVDEL
RHMSEEGLKGRLAKYVFTEDMTDAQKEEIAKPYWERLEYELGIINQMGFPGYFLIVADFI
QWAKDHEIPVGPGRGSGAGSLVAYALLITDLDPLHFSLLFERFLNPERVSMPDFDVDFCQ
DRRGEVIEYVQQKYGHDRVAQIITFGKLQAKAAVRDVGRVLSIPYGYVDKICKMIPGDPA
KPIPLKEAIDMEPDLRRIAREDPDIDRLLSIAMQIEGLYRNSSTHAAGVVIGDRDLDELV
PLYRDPRSDMPVTQFNMKYVENAGLVKFDFLGLKTLTVIIEAVNLMRLRKDVPQDFDISA
IPLDDRVAFKLLSAAETVGVFQLESQGMQDVLRGLKPDTIEDIIAVVALYRPGPMDNIPH
YIARKHGQEEPDYMHPMLQPILEETYGIMIYQEQVMQLAQTMSGYSLGGADLLRRAMGKK
IAEEMEKQRSLFVDGAEKNGVPRGQASDIFDQVAKFASYGFNKSHAAAYALVAYQTAYLK
ANYPVEFMAALMTLDMHNTEKLAIFKQEVERLGIEILPPCINNSQVAFSVENYDGVRKIR
YALAAVRNVGDAAMESLVAEREANGPFKDLTDFASRIDSRAVNKRLLENLVRAGALDCLT
TNRKVMFEHVDRVMAVSQREMQARNNDQISMFGEDTGFGKDAIRLPDERDWVPMEKLTEE
FSAIGFYLSAHPLDTFGKSLQRIGIAPIKELPARMRAQNKGSIKLAGTLINAREMISKKN
GSKFAFVMFSDPTGSFEVAFWAEAWAAYKEIINAGRPVLLVVAAEMREGQLRIQGQKVED
LEHAVSGAAEGIRIRLNRPDPVAEIRELLEKAGKGRGLVSLSTVCADGRIAEVELEDTYK
VGPSLIGAVGAIPGVELAEEI
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacggtttcgtccatcttcgtgttcacaccaactattcgcttgccgaaggtgcc
atcacgacgaaggaactggcaaagatgtgcgaggcggatggtcagcccgcggttgcgatg
accgatagcgataatatgttcggcgcgcttgatttttccggtgtgatgagcggggcgggc
gtgcagccgatccttggcgtacagatcggtgttgagcggtttggcgaccagccggttgtt
ggcaggatttcgcgtgaacccaacccggacaagctggttctgatcgcaaagaatgagcgg
gggtatttcaaccttctgaaaatcgtttcgcgggcacacatgaccagcgaagcaggcagc
gagcccaaggcgctttatgatcatatcgaacaatacagttccgacatcatctgcctgact
ggcgggccgaccgggccgctggcacggttgattgccgaggggcagcttgaggcggcaacc
gaatgcctgaacaagctttcggggatatttggcaaccggctttatatcgaattgcagcgc
cacggcgagccgatcgaggaaaaagtcgagccaggtctgatcaagctggcctatgatcac
aatatcccgctggtcgcgaccaatgactgctttttccccaaggcggaaatgtatgaagcc
cacgatgtgtttatctgcatcgggcagggtgcggttgtcgggcaggaagaccgttggcgc
ctgacaccggagcaccggttcaagactgccgacgagatgcgcgagctttttgccgacatt
cccgaggcctgtgacaacacgttgacgattgccaagcggtgttcatggcatgtcgagaaa
attgatccgatcctgccgccgtttgattgcggcgaaggccgcaccgaggtcgacgaactg
cgtcatatgtccgaggagggccttaagggccgccttgcgaaatatgtctttaccgaagat
atgacggatgcgcagaaggaagaaatcgccaaaccctattgggagcgccttgaatacgag
cttggcatcatcaatcagatggggttcccgggttacttcctgatcgttgcggactttatc
cagtgggccaaggatcatgaaatcccggttggaccgggccgtggttcgggtgcggggtcg
cttgttgcctatgccctgctgattaccgatcttgatccgctgcatttttcgttgctgttt
gaacgcttcctgaacccggaacgcgtatccatgcctgacttcgatgtcgatttctgtcag
gaccggcgcggcgaggtgattgaatatgtgcagcagaaatacggccatgaccgtgtggcg
cagatcatcacattcggtaaattacaggccaaggctgcagtgcgtgacgttggccgtgtt
ctgagcatcccgtatggctatgtcgacaaaatctgcaagatgattccgggggacccagcc
aagccgatcccgcttaaggaagccatcgacatggagccggatctgcgccggattgcgcgc
gaagacccggatattgaccggctgctgtccatcgcaatgcagatcgaaggactttatcgt
aactcgtcgacccatgccgccggggtggtgatcggcgaccgtgatcttgatgagcttgtg
ccgctttatcgtgatccgcgatccgatatgccggtgacccagttcaacatgaaatatgtt
gaaaatgccggtctggtgaagttcgacttcctcggtttgaaaaccctgacggtgattatc
gaggccgtaaatctgatgcggcttcgcaaagacgtcccgcaagactttgatatcagtgcc
attccccttgatgaccgggtggcgttcaagctgctttcggcggccgagacggtcggtgta
ttccagcttgaatcgcagggcatgcaggacgttctgcgcggcctgaagcccgatacgatc
gaagatattatcgctgtggtggcgctgtatcgtccgggcccgatggataatatcccgcat
tacatcgcgcgtaagcatggtcaggaagaacctgattacatgcacccgatgttgcagccg
atcctcgaagaaacctatggcatcatgatctatcaggaacaggtcatgcagctagcccag
acgatgtcgggctattcgcttggtggtgcggacctgttgcggcgtgcgatgggtaaaaag
atcgccgaggaaatggaaaagcagcggtcgctgtttgttgacggggcggaaaagaacggg
gtgccgcgcgggcaggcatccgacatctttgatcaggtcgccaagttcgcatcctatggc
tttaacaaatcgcacgcagcggcctatgcgctggtggcgtatcagacggcgtatcttaag
gcgaattatccggtcgagttcatggccgcgctgatgacgcttgatatgcacaacaccgaa
aagctggcgattttcaaacaggaagtcgaacggcttggcatcgaaatcctgccgccctgc
atcaataattcgcaagtggcgttttcggtggaaaattatgatggggttcgcaaaatccgt
tatgcactggcagcggtgcgtaacgttggtgatgccgcgatggaaagccttgttgcggag
cgcgaggccaatggtccgttcaaggacctgaccgatttcgcatcgcgcatcgatagccgg
gcggtcaacaagcggttgcttgaaaaccttgtgcgggcaggggcacttgattgtctgacg
acgaaccgcaaggtgatgtttgagcatgtcgaccgcgtgatggcggtttcccagcgtgaa
atgcaggcgcgcaacaatgaccagatttcgatgtttggcgaggataccggttttggcaag
gatgccatccggttgcccgatgaacgcgactgggtgccgatggaaaaactgaccgaggaa
ttttcggccatcggtttttatctttcggctcatccgctggatacctttggcaaaagtctt
cagcggatcggtattgcgccgatcaaggaacttccggcccgcatgcgcgcccagaacaag
ggatcgatcaagcttgccgggacgctgatcaatgcgcgtgaaatgatttccaagaaaaac
ggatcaaaattcgcgtttgtgatgttttccgatccgaccggcagtttcgaggtcgcgttc
tgggcagaggcatgggcggcttacaaggaaatcatcaatgccggacgaccggtattgctg
gtggtggcagccgaaatgcgcgaggggcagcttcgcatccaggggcagaaggtcgaagac
cttgagcatgcggtttcaggggctgccgagggtatccgcattcgtctgaaccggcccgat
ccggtggcggaaatccgcgaactgcttgaaaaagcggggaaagggcgtggtctggtcagt
ctttcgacggtgtgtgccgacggccgtattgccgaggtcgagcttgaagatacctataag
gtcgggccgtcccttatcggggcggtcggggccattccgggtgtcgaactggccgaggaa
atctga
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