Thalassospira lucentensis: R1T41_21425
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Entry
R1T41_21425 CDS
T09476
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
tlu
Thalassospira lucentensis
Pathway
tlu00521
Streptomycin biosynthesis
tlu00523
Polyketide sugar unit biosynthesis
tlu00525
Acarbose and validamycin biosynthesis
tlu00541
Biosynthesis of various nucleotide sugars
tlu01100
Metabolic pathways
tlu01110
Biosynthesis of secondary metabolites
tlu01250
Biosynthesis of nucleotide sugars
Module
tlu_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
tlu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
R1T41_21425 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
R1T41_21425 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
R1T41_21425 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
R1T41_21425 (rfbB)
00525 Acarbose and validamycin biosynthesis
R1T41_21425 (rfbB)
Enzymes [BR:
tlu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
R1T41_21425 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
WOI11048
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All DBs
Position
complement(4450505..4451560)
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AA seq
351 aa
AA seq
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MKLIVTGGAGFIGSAVCRLLAGQKKIEVLNLDKLTYAADLRTVESVSSLPNYRFVKQDIC
NRAELDRIFDDFQPDAVMHLAAESHVDRSIDGPSEFIQTNLVGTFTLLEAARDYFNGLSA
DRRSKFRFHHISTDEVYGSLGDEGLFTEETPYAPNSPYSASKAGSDHLVRAWHHTYGLPV
IISNCSNNYGPYQFPEKLIPLMILNVLHGKELPVYGDGKNTRDWLHVEDHADALFTILTE
GRIGEKYNVGGCNEVANIEVVRSIFDVVTRFEFDAVKSDFEAQVRFVTDRPGHDWRYAID
PSKIRDELGWEPKHSFESGLEQTVKWYLANRAWWEPILKDKYAGERLGTVK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcattgtgacaggtggtgcagggtttatcgggtcggcggtctgccggcttttg
gccgggcagaaaaagatcgaggttctcaaccttgataagctgacatatgcggccgatttg
cgcactgttgaaagtgtttcttcgttacccaactatcgtttcgtgaagcaggatatctgc
aaccgggcggaacttgaccggatatttgatgattttcagcccgacgctgtgatgcatctg
gcggcagaaagccacgtagaccgttcgattgatgggccgtctgaatttattcagacgaac
cttgttggcacattcacactgctggaagcagcacgggattatttcaacggcttatctgcc
gataggaggtcgaaatttcgatttcaccatatttcgactgacgaggtatatggttcgctt
ggggacgaggggctttttacagaagaaaccccctatgcgcccaattcgccatattctgca
agcaaggcgggatcggatcacctggtgcgcgcctggcatcatacgtatgggttgccggtg
attatcagcaattgttcgaataattacgggccctatcaattccccgagaagctgatccct
ctgatgatcctgaatgttttgcatggcaaggaattgccggtttatggcgatggtaaaaat
acgcgggactggcttcatgttgaagaccatgctgatgcgctttttaccattttgactgag
ggcagaattggcgagaaatacaatgtcggtggttgcaacgaagttgcaaatattgaggtt
gtacgcagcatctttgacgttgtaactcgcttcgagttcgacgctgtgaaaagtgacttc
gaggcacaggttcggtttgtcactgaccgcccggggcatgactggcggtatgcgattgat
ccatcgaagatacgcgacgagcttggctgggaaccaaaacacagctttgaaagcggtctg
gagcagactgtgaaatggtatctggcaaatcgggcgtggtgggagccgatcctgaaagat
aaatatgcaggtgagcggctcggaacggtgaaatag
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