Thalassospira lucentensis: R1T41_21640
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Entry
R1T41_21640 CDS
T09476
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
tlu
Thalassospira lucentensis
Brite
KEGG Orthology (KO) [BR:
tlu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tlu03000
]
R1T41_21640
Transcription factors [BR:
tlu03000
]
Prokaryotic type
Helix-turn-helix
Other families
R1T41_21640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
GAF
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA_2
HTH_30
HTH_7
HTH_23
HTH_50
HTH_28
AAA
DUF134
MCM
IstB_IS21
HTH_22
PAS_4
Mga
TIP49
IclR_C
Motif
Other DBs
NCBI-ProteinID:
WOI11089
LinkDB
All DBs
Position
complement(4493657..4495579)
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AA seq
640 aa
AA seq
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MSGNHHGGRIEAALQLSGVAQNRAVLESWQRCEQRFGLAHDTLRRPEVMPESQTRQRRDR
SGRLYHHAHDLVRTLYRKIDASGYAVFLTDNDGVILDSVAAHTLLPSFRTNGLLPGAVWS
EEREGTNGIGTCIVEGRPITIHKDEHFLAQHAVLTCTAAPVFDPEGQVCSVLDVSAVRDD
IKRTDCLRVRSLIADYADALERILFFDECASDLVLHLHPDAQHVGSTRDALISIGPDGNI
RGATSTARRLLAAADNARDVQSMFGFDLDGLITTLGVGEETSTSGSAKALPVNGGGLLFG
RVTLPEKQRRKFISMRPAPVSRSSARLAANETGDIPDQDPAIRRLYKVGSKLLTNRINVL
MSGETGSGKEHMARAIHAASVGARKPFVAINCAALPESLIESELFGHAGGAFTGAARDGF
GGRIKQADSGTLFLDEIGDMPLSAQGRLLRVLEQRTVEPLGSTKSVPVNFRLICASNVDL
TRAVADGKFREDLLYRIKGARLSLPALRERSDLPDLIARLLRGISGDMAGDVRCSDDVLE
LLSRHDWPGNIRELVNVLQYACVFAEGGLILRSHLPDDFHETVTRDPAPAGSILKRAEAD
ALRQVLDEHRWHISKTAKALGISRNTLYRKMDRFDIRREA
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaaccatcatggtggacggatcgaagctgcgttgcagttaagtggcgtcgcc
caaaatcgcgccgttcttgaaagctggcaacgttgcgaacagcgctttggccttgcccat
gacacgctacgccgtccggaagtcatgcccgaaagccaaacccggcagcgtcgtgaccgc
agcgggcggctttatcatcatgcccatgatctggtgcgcaccctttatcgcaagattgat
gcatcgggctatgcggttttcctgaccgataatgacggtgtgatccttgacagtgtggcg
gcccacacgctgctgccgtcgtttcgcaccaacggccttttgcccggtgccgtctggagc
gaggaacgcgaggggaccaatggtattggcacctgtatcgtcgaaggtcgtccgatcacc
atccacaaggacgaacattttctggcgcaacatgcggtgctgacctgtacggcggcaccg
gtgtttgaccctgaagggcaggtttgttcggtccttgatgtttctgccgtgcgcgacgac
atcaaacgtacggattgtttgcgggtccgaagcctgattgccgattatgccgatgcgctt
gaacgcattctgttctttgatgaatgtgcgtctgatctggtcctgcatcttcatcccgat
gcccagcatgtcggatcgacccgtgacgccctgatttcgattggcccggatggcaacatc
cgcggggcgacctcaaccgcgcgccgtttgctggcagcggcggacaatgcgcgcgatgtg
caatcgatgttcggttttgatcttgatggtctgatcacgacccttggcgtgggcgaggaa
acgtcgacttcgggatcggccaaggccctgccggttaatggtggggggcttttgttcggg
cgggtgaccttgcccgaaaagcagcgccgcaaattcatttcgatgcggcccgcaccagta
tcgcgttcgtctgcgcgtttagcggcgaacgaaaccggtgacatccccgatcaggacccg
gcaatccgtcgtctttacaaggtcggcagcaagcttctgaccaaccgtatcaatgttctg
atgtcgggcgaaaccggcagcggcaaggaacatatggcgcgtgccatccatgcggcgtct
gttggtgcgcgcaaaccctttgtcgcgatcaattgcgcggcccttcccgaaagcctgatc
gagagcgaattgtttggtcatgccggtggtgcctttaccggggcggcgcgtgatggtttt
ggcgggcggatcaaacaggcggatagcgggacgctgtttctggatgaaatcggcgatatg
ccgttatcggcacagggacggcttttgcgcgtgcttgagcagcgcacggttgagccgctg
ggcagtaccaagtccgtgccggtcaatttccgtctgatttgtgccagcaatgtcgatctg
acccgtgcggtggcggatggcaaattccgcgaagatctgctttaccggatcaaaggggcg
cggctttccctgccagcgcttcgcgaacggtccgatctgcccgatctcatcgcccggctt
cttcgcggtatttctggcgatatggcgggggatgttcgttgttcggacgatgttcttgaa
ttgctgtcacgccatgactggccgggcaacatccgcgaactagttaatgtcttgcaatat
gcctgcgtctttgccgagggtggtttgatcctgaggtcgcacctgcccgatgatttccac
gaaaccgttacgcgcgacccggcccctgccggatcgatcctgaagcgggctgaagccgat
gcattgcgtcaggtgcttgatgagcaccgctggcatatcagcaaaaccgccaaggcgctc
ggcatcagtcgcaatacgctttatcgcaagatggatcggttcgatataaggcgtgaagcc
tag
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