Thermotoga maritima MSB8: TM0178
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Entry
TM0178 CDS
T00022
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tma
Thermotoga maritima MSB8
Pathway
tma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TM0178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tma03400
]
TM0178
Enzymes [BR:
tma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TM0178
DNA repair and recombination proteins [BR:
tma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TM0178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
PriA_3primeBD
Zn_ribbon_6
DUF1272
Nop10p
HypA
Motif
Other DBs
NCBI-ProteinID:
AAD35271
UniProt:
Q9WY22
LinkDB
All DBs
Position
186526..188736
Genome browser
AA seq
736 aa
AA seq
DB search
MYYKVAVSGSGKVLNVFSSEELLIGERVWLNWRNGKVKGYVLERSLSHENEATPSERDGK
SFLSEGHVEIAKWVSERFFSPLGMVFDLFFPQGIDDYKEEVVVSESPFLDFDRMTLRDFL
ENFGEKALKEMVKKGLVRVEKNFYVKEPRPRVKKRLFLKKRISEIIREHLTVKQRMVVEY
LQFNDGVPLEELLEDLEVSKSVIETLQRKNIVEIVSGDVFPKKRRILRGDFKGNISKENL
FFGPTGSGKTEALFELIDVYSRKGTVLFLVPEVSVLTHTLSRLKGAFPDLKIGIYHSYLS
RARKNLEWYKAASGKIDVLLGTRSAVFVPVKNLSLLIVDEEHDESFYQHTRPSYDAIVVA
RKISEVFDVPIILSSATPDLWTYREAKEGRIRTFNFTRRFGSLSVEVVDMRNEEKIGSFA
KKTLDRIEETLEEGKRVLIYVRRKGFWGRVQCEVCGYVLKCENCDVSLVYHSDTHSLKCH
QCGREYGLVESCPRCGGRLVGRTAGTERVERELKRYFPTRRIARVDREVVDNIMELESYI
DKLIRGEIDILVGTRLITKSLSVPEIGLVCIMDVDSLIFNPDYSSSLRTFQLVVQALGRA
SRGDQGKAIIQTYNPEDTIIRKALEEDVNGFYAEELERRKALGYPPYRHLIQVAVKSKNP
EVGKNSLTSLKEFLKGEEVLGPVEHWVFKLRGFYRHHLIVKTEDLERVLPKLEKALRILG
IDAIVRVDPPTLEVSD
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtactacaaggtggctgtctccggttcgggaaaagtgctgaatgttttctcttcggaa
gagcttttgataggagaaagagtgtggttgaactggcgaaacggaaaagtcaagggttac
gtactggaacgatcgctttcccacgaaaacgaagcaacgcccagtgaaagggacggtaaa
agttttctaagcgaaggacacgtggaaatagcaaaatgggtgtctgaaaggtttttctca
cccttaggaatggttttcgatctgtttttcccacagggtatcgacgattacaaagaggaa
gtggttgtttcggaaagcccgtttttggatttcgacaggatgactctgcgcgattttctt
gaaaatttcggggaaaaagctctgaaagaaatggtgaaaaaaggcctggtgagggtggag
aaaaatttctatgtgaaagagccaagacctcgtgtgaaaaagcgattgtttctgaagaag
agaataagtgaaattattcgagaacatctaactgtgaagcagagaatggtggtggaatac
cttcaattcaacgatggggtccctcttgaggagctgctggaggatctggaggtttcaaag
agtgtgattgaaactcttcaaaggaagaatatagtagaaatagtgagtggtgacgttttt
ccaaaaaagagaaggatccttcgcggtgatttcaaaggaaatatctcgaaggaaaatctt
ttttttggtcctactggaagtggaaaaaccgaggctttgttcgagttgatcgatgtgtat
tcgaggaaaggaactgtgcttttcctcgtaccggaagtttccgtcctcacccacacgctt
tcacgtctgaagggagccttcccggacttgaaaatagggatttatcacagctacctttcc
agagcgaggaaaaatctggagtggtacaaagcggctagtggaaaaatcgatgtgcttttg
ggaacacgcagtgctgtttttgttccagttaagaatctttctctcttgatagtcgacgaa
gaacacgatgagagtttttatcaacacactcgaccttcttacgatgccatcgtggttgca
aggaaaatctctgaagttttcgatgttcccataattctgtcttctgcaacaccggatttg
tggacctacagagaggcaaaagagggtcgcatcaggacgttcaattttacgagaaggttc
gggagtttgtctgtggaagttgtcgatatgcgaaatgaagagaagataggaagttttgcg
aaaaagacccttgacagaatagaggagaccctcgaggaaggcaagagagttctcatctac
gtaaggagaaaaggtttctggggccgcgtccagtgtgaagtgtgtgggtacgtgctcaaa
tgtgaaaattgtgatgtgtctctggtgtaccattcagatacgcattccttgaaatgtcat
caatgtgggcgtgagtacggattggttgaatcctgtcctcgctgtggagggcgtctcgtc
ggaagaacagcgggaacagaaagagtggaaagggaactgaaaaggtactttccgactcgc
aggatagcgagagtcgatagagaggttgtcgataatatcatggagctggaaagttacata
gacaaattgatcagaggcgagatagatatactcgttggaaccaggttgatcacaaagagt
ctcagtgtacccgaaataggtctcgtatgtatcatggatgtggattctttaatcttcaac
cctgattattcgtcttcgcttcgtacgtttcagttggtcgttcaggcacttgggagagca
tcaagaggagatcaggggaaggcgattatccagacttacaacccggaggacacgatcatc
agaaaagctctggaagaagatgtgaacggtttttatgccgaagaactcgaaagaagaaaa
gcccttggttatcctccatatcgtcacctcattcaggttgctgtgaagtctaagaatccg
gaagttggaaagaattctctgacttctctaaaagaatttctgaaaggcgaggaggttctt
ggacccgtcgagcactgggttttcaaactgagaggattctacaggcaccatctcattgtg
aaaacagaagacttggagagagtacttccgaaactggaaaaagcgttgagaatactggga
atcgatgcgattgttcgggtcgatccacccacgctcgaggtatcagattaa
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