Thermotoga maritima MSB8: TM0258
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Entry
TM0258 CDS
T00022
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tma
Thermotoga maritima MSB8
Brite
KEGG Orthology (KO) [BR:
tma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tma03032
]
TM0258
03400 DNA repair and recombination proteins [BR:
tma03400
]
TM0258
Enzymes [BR:
tma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TM0258
DNA replication proteins [BR:
tma03032
]
Prokaryotic type
DNA Topoisomerases
TM0258
DNA repair and recombination proteins [BR:
tma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TM0258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
HTH_17
CoV_NSP2_N
FAINT
Motif
Other DBs
NCBI-ProteinID:
AAD35346
UniProt:
P46799
Structure
PDB
PDBj
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All DBs
Position
266931..268832
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AA seq
633 aa
AA seq
DB search
MSKKVKKYIVVESPAKAKTIKSILGNEYEVFASMGHIIDLPKSKFGVDLEKDFEPEFAVI
KGKEKVVEKLKDLAKKGELLIASDMDREGEAIAWHIARVTNTLGRKNRIVFSEITPRVIR
EAVKNPREIDMKKVRAQLARRILDRIVGYSLSPVLWRNFKSNLSAGRVQSATLKLVCDRE
REILRFVPKKYHRITVNFDGLTAEIDVKEKKFFDAETLKEIQSIDELVVEEKKVSVKKFA
PPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYEGVETKDGHIAFITYMRTDSTRVSDYA
KEEARNLITEVFGEEYVGSKRERRKSNAKIQDAHEAIRPTNVFMTPEEAGKYLNSDQKKL
YELIWKRFLASQMKPSQYEETRFVLRTKDGKYRFKGTVLKKIFDGYEKVWKTERNTGEFP
FEEGESVKPVVVKIEEQETKPKPRYTEGSLVKEMERLGIGRPSTYASTIKLLLNRGYIKK
IRGYLYPTIVGSVVMDYLEKKYSDVVSVSFTAEMEKDLDEVEQGKKTDKIVLREFYESFS
SVFDRNDRIVVDFPTNQKCSCGKEMRLSFGKYGFYLKCECGKTRSVKNDEIAVIDDGKIF
LGRKDSESGSPDGRSVEGKGNLSEKRRKGKKGS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaagtgaagaaatatatcgttgttgaatctcctgccaaggcgaagacgatc
aagagtattcttgggaatgagtacgaagtattcgcttcgatggggcacatcatagacctt
cccaagagcaagttcggtgtggatctggaaaaggatttcgaaccggaattcgcggtgata
aaagggaaagagaaggtagttgaaaagctgaaggatcttgcaaaaaaaggcgaactgctc
atcgcttctgatatggatagagaaggggaagccatagcctggcacatagccagggtaacg
aacacactggggagaaagaacaggatcgtgttctctgagatcactcctcgtgtgataaga
gaagccgttaagaatcctcgagagattgacatgaagaaagttcgtgcgcagcttgcaaga
aggattttagacaggatcgttggttattctctgagtccggttctctggagaaacttcaaa
tccaatttgagcgctggtagagtccaatcagcaaccttgaagctcgtttgtgacagagag
agagaaatcctcaggtttgtgccaaagaagtaccacaggatcaccgtcaatttcgatggt
ctcacagcagaaatagatgtgaaagaaaagaagttcttcgacgctgaaacgttgaaagaa
atccagagcatagacgaactcgttgtagaagagaaaaaggtttctgtgaaaaagtttgcg
cctccagaacccttcaaaaccagtaccctccagcaggaagcgtattctaaactgggtttc
tccgtttccaaaaccatgatgattgcccagcagttgtatgaaggcgtggaaacaaaagat
gggcatatcgcgttcataacctatatgagaacagattcaacgcgtgtttcggactacgcg
aaagaagaagccagaaatctgataacggaggtctttggagaagagtacgttggttcaaag
agagaaaggagaaagagcaacgcaaaaatacaggatgcgcatgaggcgattcgtcccacg
aacgttttcatgacacctgaagaagcgggaaaatacctgaattctgaccagaaaaaactc
tacgagttgatatggaagagatttctcgcatcgcaaatgaagccttctcaatacgaggaa
actcgttttgtcctgagaacaaaggatgggaagtacagattcaagggaacggtgctgaag
aagattttcgatgggtacgaaaaggtgtggaagacggaaagaaacacgggagagtttcct
ttcgaagagggagaatctgtgaaaccggtggttgtaaaaatagaggaacaggaaaccaaa
ccgaaaccaaggtacacagagggttctcttgtaaaagaaatggaaagactcggtataggt
cgtcccagcacatatgcgtccacgataaagcttttgctgaacaggggttacataaaaaag
atcaggggctatctctatccaacgatcgttggaagcgttgtcatggattatctggagaaa
aagtactctgatgttgttagcgtttccttcacagctgaaatggaaaaggacctcgatgaa
gtcgaacagggtaagaaaacagacaaaatcgttctgcgggagttttatgaatccttttcc
agtgtgttcgacaggaacgacagaattgtggttgattttccgacgaaccagaaatgttcg
tgtggaaaggaaatgaggctctcttttggaaaatacggcttctatttgaaatgcgagtgt
ggtaaaaccagaagcgtgaaaaacgatgaaattgcggtcatagacgatggaaaaatattc
ctggggaggaaagacagtgagagtggctctcctgatgggaggagtgtcgagggaaaggga
aatctctctgagaagcggagaaagggtaaaaaaggctcttga
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