Thermotoga maritima MSB8: TM0433
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Entry
TM0433 CDS
T00022
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tma
Thermotoga maritima MSB8
Pathway
tma00040
Pentose and glucuronate interconversions
tma01100
Metabolic pathways
tma02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tma00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
TM0433
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TM0433
Enzymes [BR:
tma01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
TM0433
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AAD35518
UniProt:
Q9WYR4
Structure
PDB
PDBj
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Position
453872..454975
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AA seq
367 aa
AA seq
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MLMRFSRVVSLVLLLVFTAVLTGAVKASLNDKPVGFASVPTADLPEGTVGGLGGEIVFVR
TAEELEKYTTAEGKYVIVVDGTIVFEPKREIKVLSDKTIVGINDAKIVGGGLVIKDAQNV
IIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHCTFVNGNDGAVDIKKYSNYITV
SWCKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNCIQRMPRIRFGMAHVFNNFY
SMGLRTGVSGNVFPIYGVASAMGAKVHVEGNYFMGYGAVMAEAGIAFLPTRIMGPVEGYL
TLGEGDAKNEFYYCKEPEVRPVEEGKPALDPREYYDYTLDPVQDVPKIVVDGAGAGKLVF
EELNTAQ
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgctcatgaggttttctcgtgtggtttctttagtactgcttcttgttttcacagctgtt
ctaactggtgctgtaaaagcttctctcaatgacaaacctgtgggatttgcatccgtaccg
acggcggatttaccggagggcacagttggtggattgggtggtgagatcgttttcgtcaga
acagcggaagaactggagaaatacacaacagcagaaggaaagtacgtaatagtcgttgat
ggaacgatcgtttttgaaccaaagagagaaattaaagttctttcagacaaaacgatcgtg
ggaataaacgatgcaaagatagtcggtggaggtcttgtgataaaggatgcccagaatgtg
atcataagaaatattcattttgagggcttttacatggaggacgatcctcggggtaagaag
tatgatttcgactatatcaacgtggaaaattctcatcatatctggatcgaccactgtacc
ttcgtcaacggcaacgatggtgcagtggatattaaaaaatactcaaactacatcactgtt
tcctggtgtaaatttgtggatcacgacaaggtctccctcgttggttcctccgacaaagaa
gatccggaacaggcagggcaggcttacaaggtcacgtaccaccataactacttcaagaac
tgtattcagagaatgcccagaattagatttggaatggcacacgtgttcaataacttctac
agcatgggcctgagaacaggtgtctctggaaacgtcttccccatttacggtgttgcttca
gcgatgggagcgaaagtccacgttgaaggaaactacttcatgggatacggtgctgtgatg
gcagaggcgggaattgcgttccttcccaccagaatcatgggtcccgtggaaggttatctg
acgctcggtgaaggagatgcaaagaatgaattttactactgtaaagaacctgaagtgcgt
cctgttgaggaaggaaaacccgctctcgatccacgcgagtactacgattacacgcttgat
ccagttcaagatgttccaaaaatcgttgtagatggagcaggagcagggaaactggtgttt
gaagaactaaatacggctcagtaa
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