Thermotoga maritima MSB8: TM1228
Help
Entry
TM1228 CDS
T00022
Name
(GenBank) transcriptional regulator, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
tma
Thermotoga maritima MSB8
Brite
KEGG Orthology (KO) [BR:
tma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tma03000
]
TM1228
Transcription factors [BR:
tma03000
]
Prokaryotic type
Helix-turn-helix
Other families
TM1228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
HTH_11
HTH_17
E1-E2_ATPase
HTH_AsnC-type
Fe_dep_repress
HTH_28
MerR_1
HTH_24
Xre-like-HTH
MerR
HTH_23
HTH_Crp_2
HTH_29
HTH_36
HHH_5
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AAD36303
UniProt:
Q9X0V5
LinkDB
All DBs
Position
complement(1253824..1254624)
Genome browser
AA seq
266 aa
AA seq
DB search
MKIRDKILNVYTQFSPAERKVADYVLERPDDVIHYSITEFAKIVGVSETTIHRMIKKLDF
EGYQAFKIALARELSGLEETIERRDFIDEEIDILRRLKDTLDMKNVEKAVEWILSAHRIL
FFGVGLSGVVSEYASLKFSLLGFHTFFSNDPHVQVIEAVNLTGEDLVISISHTGNIRDTV
KSTQVAKDMGAKTIAITTNRQSELAKVVHLVLQSPPVKYDTYEFLRENIGEIAVVDVLFK
ETFQRIYRERKKHFENLEGVFKPKRF
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
ttgaagataagagataaaattctgaacgtctacacacagttcagtcctgcagagcgcaaa
gtcgcggattacgtgctcgaaaggccggacgatgtcatccactactcgatcacagagttc
gcaaagatcgtgggtgtgagcgaaaccacgattcacaggatgatcaaaaagctcgatttc
gaaggttaccaggccttcaagatcgcacttgcaagagaactcagcgggctcgaagaaacc
atagaaagaagagatttcatagacgaggagatagacatcctcagaaggctcaaggacacc
ctcgatatgaagaacgtggaaaaggcggtggagtggatactctccgcccaccgcattctt
ttcttcggtgtgggactctcgggagtggtttctgagtacgcgagcctgaagttctctctt
cttggcttccacacgttcttttccaacgacccgcacgttcaggtgatagaggccgtgaat
ctgaccggtgaagacctggtgatctcgatcagtcacacgggaaacatcagagacacggtg
aaatccacccaggtggcaaaagacatgggagcgaagacgatcgcaatcacaacgaacaga
cagtcagaactcgccaaggtggttcatctggtgcttcaaagcccgcccgtgaagtacgac
acctacgaattcctcagggagaacatcggagagatcgccgttgtggatgtgctcttcaag
gaaacgttccaaagaatataccgggagaggaagaaacacttcgaaaacctggaaggagtg
ttcaaaccgaagagattttga
DBGET
integrated database retrieval system
