Thermotoga maritima MSB8: TM1619
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Entry
TM1619 CDS
T00022
Name
(GenBank) DNA-directed DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tma
Thermotoga maritima MSB8
Pathway
tma03030
DNA replication
tma03410
Base excision repair
tma03420
Nucleotide excision repair
tma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TM1619
03410 Base excision repair
TM1619
03420 Nucleotide excision repair
TM1619
03440 Homologous recombination
TM1619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tma03032
]
TM1619
03400 DNA repair and recombination proteins [BR:
tma03400
]
TM1619
Enzymes [BR:
tma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TM1619
DNA replication proteins [BR:
tma03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TM1619
DNA repair and recombination proteins [BR:
tma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TM1619
NER (nucleotide excision repair)
GGR (global genome repair) factors
TM1619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Ribosomal_L12
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AAD36686
UniProt:
Q9X1V4
LinkDB
All DBs
Position
complement(1605698..1608379)
Genome browser
AA seq
893 aa
AA seq
DB search
MARLFLFDGTALAYRAYYALDRSLSTSTGIPTNATYGVARMLVRFIKDHIIVGKDYVAVA
FDKKAATFRHKLLETYKAQRPKTPDLLIQQLPYIKKLVEALGMKVLEVEGYEADDIIATL
AVKGLPLFDEIFIVTGDKDMLQLVNEKIKVWRIVKGISDLELYDAQKVKEKYGVEPQQIP
DLLALTGDEIDNIPGVTGIGEKTAVQLLEKYKDLEDILNHVRELPQKVRKALLRDRENAI
LSKKLAILETNVPIEINWEELRYQGYDREKLLPLLKELEFASIMKELQLYEESEPVGYRI
VKDLVEFEKLIEKLRESPSFAIDLETSSLDPFDCDIVGISVSFKPKEAYYIPLHHRNAQN
LDEKEVLKKLKEILEDPGAKIVGQNLKFDYKVLMVKGVEPVPPYFDTMIAAYLLEPNEKK
FNLDDLALKFLGYKMTSYQELMSFSFPLFGFSFADVPVEKAANYSCEDADITYRLYKTLS
LKLHEADLENVFYKIEMPLVNVLARMELNGVYVDTEFLKKLSEEYGKKLEELAEEIYRIA
GEPFNINSPKQVSRILFEKLGIKPRGKTTKTGDYSTRIEVLEELAGEHEIIPLILEYRKI
QKLKSTYIDALPKMVNPKTGRIHASFNQTGTATGRLSSSDPNLQNLPTKSEEGKEIRKAI
VPQDPNWWIVSADYSQIELRILAHLSGDENLLRAFEEGIDVHTLTASRIFNVKPEEVTEE
MRRAGKMVNFSIIYGVTPYGLSVRLGVPVKEAEKMIVNYFVLYPKVRDYIQRVVSEAKEK
GYVRTLFGRKRDIPQLMARDRNTQAEGERIAINTPIQGTAADIIKLAMIEIDRELKERKM
RSKMIIQVHDELVFEVPNEEKDALVELVKDRMTNVVKLSVPLEVDVTIGKTWS
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcgagactatttctctttgatggaactgctctggcctacagagcgtactatgcgctc
gatagatcgctttctacttccaccggcattcccacaaacgccacatacggtgtggcgagg
atgctggtgagattcatcaaagaccatatcattgtcggaaaagactacgttgctgtggct
ttcgacaaaaaagctgccaccttcagacacaagctcctcgagacttacaaggctcaaaga
ccaaagactccggatctcctgattcagcagcttccgtacataaagaagctggtcgaagcc
cttggaatgaaagtgctggaggtagaaggatacgaagcggacgatataattgccactctg
gctgtgaaggggcttccgctttttgatgaaatattcatagtgaccggagataaagacatg
cttcagcttgtgaacgaaaagatcaaggtgtggcgaatcgtaaaagggatatccgatctg
gaactttacgatgcgcagaaggtgaaggaaaaatacggtgttgaaccccagcagatcccg
gatcttctggctctaaccggagatgaaatagacaacatccccggtgtaactgggataggt
gaaaagactgctgttcagcttctagagaagtacaaagacctcgaagacatactgaatcat
gttcgcgaacttcctcaaaaggtgagaaaagccctgcttcgagacagagaaaacgccatt
ctcagcaaaaagctggcgattctggaaacaaacgttcccattgaaataaactgggaagaa
cttcgctaccagggctacgacagagagaaactcttaccacttttgaaagaactggaattc
gcatccatcatgaaggaacttcaactgtacgaagagtccgaacccgttggatacagaata
gtgaaagacctagtggaatttgaaaaactcatagagaaactgagagaatccccttcgttc
gccatagatcttgagacgtcttccctcgatcctttcgactgcgacattgtcggtatctct
gtgtctttcaaaccaaaggaagcgtactacataccactccatcatagaaacgcccagaac
ctggacgaaaaagaggttctgaaaaagctcaaagaaattctggaggaccccggagcaaag
atcgttggtcagaatttgaaattcgattacaaggtgttgatggtgaagggtgttgaacct
gttcctccttacttcgacacgatgatagcggcttaccttcttgagccgaacgaaaagaag
ttcaatctggacgatctcgcattgaaatttcttggatacaaaatgacatcttaccaagag
ctcatgtccttctcttttccgctgtttggtttcagttttgccgatgttcctgtagaaaaa
gcagcgaactactcctgtgaagatgcagacatcacctacagactttacaagaccctgagc
ttaaaactccacgaggcagatctggaaaacgtgttctacaagatagaaatgccccttgtg
aacgtgcttgcacggatggaactgaacggtgtgtatgtggacacagagttcctgaagaaa
ctctcagaagagtacggaaaaaaactcgaagaactggcagaggaaatatacaggatagct
ggagagccgttcaacataaactcaccgaagcaggtttcaaggatcctttttgaaaaactc
ggcataaaaccacgtggtaaaacgacgaaaacgggagactattcaacacgcatagaagtc
ctcgaggaacttgccggtgaacacgaaatcattcctctgattcttgaatacagaaagata
cagaaattgaaatcaacctacatagacgctcttcccaagatggtcaacccaaagaccgga
aggattcatgcttctttcaatcaaacggggactgccactggaagacttagcagcagcgat
cccaatcttcagaacctcccgacgaaaagtgaagagggaaaagaaatcaggaaagcgata
gttcctcaggatccaaactggtggatcgtcagtgccgactactcccaaatagaactgagg
atcctcgcccatctcagtggtgatgagaatcttttgagggcattcgaagagggcatcgac
gtccacactctaacagcttccagaatattcaacgtgaaacccgaagaagtaaccgaagaa
atgcgccgcgctggtaaaatggttaatttttccatcatatacggtgtaacaccttacggt
ctgtctgtgaggcttggagtacctgtgaaagaagcagaaaagatgatcgtcaactacttc
gtcctctacccaaaggtgcgcgattacattcagagggtcgtatcggaagcgaaagaaaaa
ggctatgttagaacgctgtttggaagaaaaagagacataccacagctcatggcccgggac
aggaacacacaggctgaaggagaacgaattgccataaacactcccatacagggtacagca
gcggatataataaagctggctatgatagaaatagacagggaactgaaagaaagaaaaatg
agatcgaagatgatcatacaggtccacgacgaactggtttttgaagtgcccaatgaggaa
aaggacgcgctcgtcgagctggtgaaagacagaatgacgaatgtggtaaagctttcagtg
ccgctcgaagtggatgtaaccatcggcaaaacatggtcgtga
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