Thermosulfurimonas marina: FVE67_03470
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Entry
FVE67_03470 CDS
T06536
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tmai
Thermosulfurimonas marina
Brite
KEGG Orthology (KO) [BR:
tmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmai03016
]
FVE67_03470
Enzymes [BR:
tmai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FVE67_03470
Transfer RNA biogenesis [BR:
tmai03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FVE67_03470
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QJA05911
UniProt:
A0A6H1WRV4
LinkDB
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Position
649390..651378
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AA seq
662 aa
AA seq
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MEGPEIRDRIAEVIQHGRPQAAFVLGQKGKRLRVLLPSGKEETVSSGQTLLVSRKTYPRL
SRQEILDLLAQSEARRQALAEELDLSEIWELVEGEAESFDPFELAEIYFGSGVEEDQVAA
LVRAVLADRLYFRLRDGRITVHSREEVERLLLARKREEERLRRLSLGERFLGALVRGESP
PEIPEEIRAYYLSALRDYCLFGEEAPKAKEIKEILSRLKATGPETPFRLLVRAGVFEEDE
NLEILRFRLPVEFPEEVLEEAEGLFPEEIPREDFNGLETFTIDAEDTRDFDDALSLERQE
GKLVVGVHITDVASVVPPDSRTLSEARRRGQTLYLPERIIPMLPPVLSEERLSLREGERR
PALSFFLHFSPEGKLLRTEIRLTEIRVSRRLTYEEVDQALAEGKEPFFTLHTLARAFQEE
RRRQGAFAVTLPEVVIRVEEGEIRLERLEFTAARELVAECMIAANYAAARFLHERGIPAL
YRYQKEPLERILKEGEEADLVRAFQQLRFLVRGELGLSPEFHHGLGLPAYTTVTSPIRRL
LDLLMQHQIRAALLGRTPPFSEEALREILVELEEVQAAAAQVRTRTQRYWLLKYLRLHFQ
GRTLPALVLEAGERRARVLLPDLMLPAELPLPPGHGLRVGEEIRVKVQRVHPRLEVLKLA
LA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcccggagattcgggaccgcatcgccgaggtgatccagcacggacgtccgcag
gcggccttcgttctgggacaaaagggcaagcgcctgcgggtccttctcccctcaggaaag
gaagagacggtctcctctggccaaactctcctcgtctcccgaaagacctaccctcggctt
tcccggcaggaaatcttggatctcctggcccagagcgaggcccgccggcaggccctggcc
gaggaactcgacctttccgagatctgggaactggtagagggggaggccgaaagctttgac
ccctttgagctggccgaaatctattttggttccggggtagaggaggaccaggtggcggcc
ctggtgcgggccgtgctggccgaccgtctctatttccgcctacgcgacgggcgtatcacc
gtgcactctcgggaggaggtggagcgcctccttctggcccgcaagcgagaggaagaacgc
ctgaggcgcctgagcctcggagagaggtttttaggggccctggtgcgcggagaaagtccc
ccggagatccccgaagaaattagggcctactatctttccgccctgcgggactactgtctt
tttggagaggaagcccccaaggccaaggagatcaaggaaatcctctcccgcctcaaggcc
accggaccggagacccctttccggctcctggtaagggccggggtctttgaggaggacgaa
aacctcgaaatcttgcgctttcgtcttccggtggaatttccggaggaggtcctggaggag
gccgaaggtctttttcccgaagagatcccccgagaggacttcaacgggctagagaccttt
accatcgacgccgaggatacccgcgactttgacgatgccctttccctggaaaggcaggaa
gggaagttggtggtgggggtacacatcaccgacgtggcctcggtggtcccccccgactcg
cgcactctctccgaggcccggcgccggggccagaccctctatcttcccgaaaggatcatc
cccatgctccccccggtgctttccgaggagcgcttaagtctccgggagggagaacgccga
ccggccctttccttttttctccatttttccccggaagggaaactcctccggacggagatc
cggcttacagagattcgggtaagccgtcggctcacctatgaggaggtggatcaggctctg
gcggagggaaaggagcccttttttaccctccacaccctggcccgggcctttcaggaggag
cgtcgtcggcagggggcctttgcggtcaccctcccggaggtggtcatccgggtggaggag
ggggagattcgtttggagcgcctggagtttacggccgcccgggagctggtggccgaatgc
atgatcgccgccaactacgccgcggcccgctttcttcacgaaagggggatcccggccctc
tatcggtaccagaaggagcccctggaaaggatcctcaaggagggagaagaggccgatctg
gtgcgggcctttcagcaattgcgctttctggtaaggggggaactgggactctctccggaa
tttcatcacggcctggggcttccagcctacaccacggtaacctcccccatccggcggctc
ttggatcttttgatgcaacaccagatccgagcggccctcctggggcgcactccgcccttc
tccgaagaggccctgcgggagatcctggtggagctggaggaggtccaggccgcagccgct
caggtgcgcacccgcactcagcgctactggctcctcaagtatcttcggctccactttcag
gggcgcactctgccggccctggtgctggaggccggagaaagacgggctcgggttctcctt
ccggatcttatgcttccggccgaactgccccttcctccgggccacggcctccgggtcgga
gaggagatccgggtcaaggtccagagggttcaccctcggctggaggtcctcaaactcgct
ttggcttaa
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