Thermosulfurimonas marina: FVE67_09115
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Entry
FVE67_09115 CDS
T06536
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
tmai
Thermosulfurimonas marina
Pathway
tmai02020
Two-component system
tmai02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tmai00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FVE67_09115 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FVE67_09115 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmai03021
]
FVE67_09115 (rpoN)
Transcription machinery [BR:
tmai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FVE67_09115 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
HTH_23
HTH_IclR
HTH_Crp_2
HTH_6
LacI
HTH_38
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_3
HTH_32
HTH_31
HTH_21
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QJA06937
UniProt:
A0A6H1WUR1
LinkDB
All DBs
Position
1754657..1756039
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AA seq
460 aa
AA seq
DB search
MALELKTQLKLRPELILTPQLRLALKLLQMNRLELEEYLRTEVEKNPVLELREEDLSLEA
LAPTGELHQDEEHPWEALFAEEFSPYPSFSFEEPEEISWESRLKQEEGLYEHLRWQLTLA
ALSEEDLRLAEYLLRNLDERGYLTLSPAEAARDLGVSSERVEEVRRKIQFFDPVGVASLS
VEECLLVQLDYLGFSDSLAARLVREHFRDLAKGVDFLAQKLQVPPEEVAEALEIIRGLEP
FPGRAFSSGQTLYLTPDVIFYKEGGRWRVRLYEEGLPRLRISPYYRRLLADPTVPRKVKF
FLRDKLRAAEWLMKSLDQRGKTLLRVAEVLADLQRDFLEKGPAYLRPLNLREVAERVGVH
ESTVSRVTHRKYAETPNGLVELKSFFPSGLKKIGGGAVSSEAVKEYLRELILKENPQKPY
TDQELARMLSQKYGVKIARRTVAKYREILGIPSARVRKKV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggccctagaactcaagacccagctcaaactaaggccggaactcatcttgacccctcag
ctccggctggccttaaagcttcttcagatgaatcgtctggaacttgaagaatatttacgc
acggaggtggagaagaatccggtcctggaactcagggaggaagacctgtctctagaggcc
ttggcccctacgggagagctacaccaggacgaagagcatccctgggaggccctctttgcg
gaggagttttctccttaccccagttttagtttcgaagagccggaggagatttcctgggag
tcccgcctcaaacaagaagagggactttatgagcatctgcgctggcaactgactctggcg
gccctttccgaagaggatttacgcctggcggaatatctcctgcggaatctcgatgagcgg
gggtatttgaccctcagtccggccgaagcggcgcgggacctgggagtttcttcagaacgg
gtggaagaggtccggagaaaaatccagtttttcgatccggtgggagtggcctccctttcg
gtggaagaatgtctcctggtccagcttgattatctgggattttcggatagtttggccgcg
cgcttggtgcgagagcattttcgggatctggccaagggggtggattttttggcgcagaaa
ttacaggttcccccggaagaagtggccgaggccctggagatcattcgggggcttgagccc
tttcctggacgggccttttcttcgggccagaccctttatctcactccggatgtcattttt
tacaaggagggagggcgttggcgggttcggctttatgaggaaggccttcctcgtctgcgc
atcagcccttattatcgacgcctcctggctgatcccaccgtgccccggaaggtaaagttt
ttcttgagggacaaattgcgggccgcggaatggctcatgaaaagcctggatcaacgggga
aagacccttctgcgggtggccgaagtcctggcagatctacagagggattttttggagaag
ggcccggcctatcttcggcccctcaatctccgagaagtggccgaaagggtaggggtgcat
gagtccacggtaagtcgggtcacccatcgcaagtacgccgaaacccctaacggtctggtg
gagctcaaatctttcttcccctcgggtctgaaaaaaattgggggaggggcggtctcctcg
gaggccgtgaaagagtacctgcgagagcttatattaaaagaaaacccacaaaagccttat
acggatcaagagttggcgcggatgctttctcaaaaatatggggttaaaattgcccgccga
accgtagccaaataccgggagatcctgggcatcccttcggccagggtccgtaaaaaagtc
tag
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