Tenacibaculum maritimum: MARIT_1356
Help
Entry
MARIT_1356 CDS
T05240
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tmar
Tenacibaculum maritimum
Pathway
tmar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MARIT_1356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmar03019
]
MARIT_1356
03009 Ribosome biogenesis [BR:
tmar03009
]
MARIT_1356
Enzymes [BR:
tmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MARIT_1356
Messenger RNA biogenesis [BR:
tmar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MARIT_1356
Ribosome biogenesis [BR:
tmar03009
]
Prokaryotic type
rRNA helicases
MARIT_1356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
RecG_N
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
SFZ81951
UniProt:
A0A2H1E957
LinkDB
All DBs
Position
complement(1440396..1442294)
Genome browser
AA seq
632 aa
AA seq
DB search
MKHSVFINKVNVELRIRIYRWASVNSSKKHSMSTFLELGLKEPINKALTDLGYEKPTVIQ
EKAIPQIISSTDDLKAFAQTGTGKTAAFSLPLLELIDDSNKNTQAIILSPTRELAVQIGN
NIKDFSKYLPNLKVVTVYGGSNIEEQIRGLKKGAQIVVGTPGRTVDLINRRALKLGNIQW
LVLDEADEMLNMGFKDELDKVLEATPETKQTLLFSATFPREVEAIAKNYMTNPVEITSGE
KNQGSDNVSHEYYLVTERTRYPALKRVADLNPNIYGIVFCRTRRETQEVADNLIKDGYSA
DALHGDLSQAQRDSVMNKFRKKRVQILVATDVAARGLDVNNLTHVINHKLPDQIENYNHR
SGRTGRAGNKGISIALVTKKEQGRLRPIERIIKKKFIHTPVPSGKEICQNQLFHLIDKVQ
NAEVNTSQINDFLPNIYEKLEELSREELIQKFVSLEFNSFLSYYENAPDLNDLSSKSNSR
GRSDNENMTRFFINIGRKDKLNPGKLIGLINDQNIGDKVEIGAIDILDTFSFFEIDKNYE
EKTLEAFQLNSPDFDGRSVNIEITNKDRSGRGKRRRGKKPFGGKKGGDFGRRRSAEFSNK
NDSGKKSRHSDRSDRASSSRKTGSFGRRRRER
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaaacattctgtttttatcaataaagtcaatgtcgaattaagaatacgaatttacagg
tgggcgtctgtgaattcttcaaaaaaacacagtatgtcaacatttttagagttaggctta
aaagagcctataaacaaagcgttaactgatttaggttatgaaaaacctacagttatccaa
gaaaaagcaatccctcaaattatatcatctactgatgacttaaaagcttttgctcaaacg
ggaacaggtaaaacagctgcatttagcttacctcttcttgaattaattgatgatagtaat
aaaaatacacaagctatcatcttatctcctacccgtgaactcgctgttcaaataggaaat
aacatcaaagatttctctaagtatttaccaaacttaaaggttgttacagtatatggagga
tctaacatagaagaacagatcagaggtttgaaaaaaggagcacaaattgtggttggtact
cctggtaggacggtagatctaataaatcgtagagccctaaaactaggaaatattcaatgg
ttagttttagatgaagctgatgaaatgttaaatatgggctttaaagacgaattagataaa
gtcttagaagcaaccccagaaacaaagcaaacattgcttttttcagccacctttcctaga
gaagttgaagctattgctaaaaactacatgaccaatcctgttgaaattacttcaggtgaa
aaaaatcaaggatctgacaatgtaagtcatgaatattatcttgttacagaaagaactcgt
tatcctgctttaaaaagagtggccgatttaaatccaaatatctacgggattgtattctgt
aggactcgtcgtgaaactcaagaagttgccgataatttaataaaagatggatatagtgct
gatgctcttcatggtgatttatctcaagcacaaagagatagtgtaatgaataaattccgc
aaaaaaagagttcaaatattagtagctactgatgttgctgcacgtggattagatgtaaat
aacttaacgcatgtaatcaaccataaattaccagaccaaattgaaaactacaatcaccgt
agtggtcgtactggtagggctggaaacaaagggatttcaattgctctagttactaaaaaa
gagcaaggaagattaagacccattgaacgtatcattaaaaagaaatttattcatacacct
gttccttctggaaaagaaatttgtcaaaatcaattatttcatttaatcgataaggttcaa
aatgcagaggttaatacttctcaaatcaatgatttccttcctaatatatatgaaaagcta
gaagaattaagtcgtgaagaactaattcaaaaatttgtctcattagaattcaactcattt
ttatcgtactatgaaaatgcccctgatttaaatgatttatcttcaaaaagtaactctaga
ggaagaagcgataatgaaaacatgactcgtttcttcattaatatcggtcgtaaagataaa
ctaaatccaggtaaattaattggattaatcaacgaccaaaatattggggataaggtagaa
ataggtgctattgatattttagataccttctctttcttcgaaatagataaaaattatgaa
gaaaaaacactggaagcctttcaattaaatagtcctgatttcgatggacgctctgttaat
atcgaaattactaataaagatcgttctggtagaggaaaaagacgaagaggaaaaaaacct
ttcggcgggaaaaaaggaggagattttggaagacgtagaagtgctgaattttctaataaa
aatgattcaggaaaaaaatctaggcattctgacagatctgatagagcatctagcagtaga
aaaactgggagttttggaagaagacgcagagaacgttaa
DBGET
integrated database retrieval system
