Tenacibaculum maritimum: MARIT_1495
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Entry
MARIT_1495 CDS
T05240
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tmar
Tenacibaculum maritimum
Pathway
tmar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MARIT_1495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmar03019
]
MARIT_1495
03400 DNA repair and recombination proteins [BR:
tmar03400
]
MARIT_1495
Enzymes [BR:
tmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MARIT_1495
Messenger RNA biogenesis [BR:
tmar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MARIT_1495
DNA repair and recombination proteins [BR:
tmar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MARIT_1495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
GARS_N
KH_Mug60-KHD4
Hanta_Gn-B
Motif
Other DBs
NCBI-ProteinID:
SFZ82216
UniProt:
A0A2H1E935
LinkDB
All DBs
Position
1581909..1584089
Genome browser
AA seq
726 aa
AA seq
DB search
MDLHGPLKKFFGFNQFKGLQEDVIKSIMNDNNTFVIMPTGGGKSLCYQLPALMKEGTAIV
VSPLIALMKNQVDAIRGISENQGIAHVLNSSLNKTEIAQVKKDISEGVTKLLYVAPESLI
KEEYADFLRTQKISFVAIDEAHCISEWGHDFRPEYRNLRHIIKQIDNVPVIGLTATATEK
VQEDILKTLGMSDANTFKASFNRANLFYEVRPKTKEVEKDIIRFVKQRVGKSGIVYCLSR
KKVEEIAQVLQVNGINALPYHAGLDAKTRAKHQDMFLMEDCDVVVATIAFGMGIDKPDVR
YVIHHDIPKSLESYYQETGRAGRDGGEGHCLAFYAYKDIEKLEKFMANKPVAEQEIGHAL
LQEVVGYAETSMNRRKYILHYFGEDFDEKNGEGADMDDNTRNPKKKHEAQEDVVKLLSVV
RDTNEKYKAKEIVNTLIGKENAMLKSHRTPSQPFFGIGKDKDGKYWMALIRQVLVVNYLR
KEIEQYGVLKITAKGKEYIDNPSSFMMTKDHIYNDSDDGTIITNAKSTAISDDKLVKLLK
DLRKKVAVKQGVPPFAVFQDPSIDDMALKYPMTLEELSKVHGVGEGKARKFGKDFIKLIT
AYVEENDIIRPDDLIVKSTGVNSGLKLYIIQNTDRKLPLNDIAQSKGLEMEELIKEMEAI
IFSGTKLNIDYAIDDILDEDQQEEIYDYFMEAETDKIQDALDEFDGDYDDEELRLMRIKF
TNEVAN
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggatttacatggcccgttaaaaaagttttttggttttaaccaatttaaaggtttacaa
gaagatgtaattaagagtattatgaatgataataatacttttgtaattatgcctactggt
ggagggaaatctttatgctatcaactgcctgctttaatgaaagaaggaacagctattgtt
gtttctccgttaatagcattgatgaaaaatcaggttgatgcaattagaggtatttcagaa
aatcagggtattgcgcatgttttaaattcatctttaaataaaacagaaatagcacaagtt
aaaaaagatatttcagaaggggtaacaaaattattatatgtagctccagaatcattaata
aaagaggaatatgcagactttctaagaactcaaaaaatatcttttgttgctattgatgag
gcgcattgtatttcggagtggggacatgattttagacctgaataccgcaatttaagacat
attatcaaacaaatagataatgttcctgtaatagggttgactgctactgctacagaaaag
gtacaggaagatatcctaaagaccttaggcatgagtgatgcgaatacttttaaagcctct
tttaatagagcaaatttattttatgaagtgcgccccaaaacaaaagaagtagaaaaagat
attattcgttttgtgaagcaacgagtaggaaaatcgggtattgtttattgtttaagtcgt
aagaaagtagaggaaatagcacaagttttacaagttaatggaattaatgcattgccttat
catgcaggtttagatgcaaagacaagagctaagcatcaagatatgtttttgatggaagat
tgtgatgttgtagtggctacaatcgcttttggtatgggaatagataaacctgatgtacgt
tatgtaatacaccatgatatcccaaaaagtttagaaagctattatcaagaaactggtaga
gcaggacgtgatggaggtgaaggacactgtttagctttttatgcttataaagatattgag
aaattagaaaaatttatggcaaataagccagtagcagaacaagaaatagggcatgctttg
ttacaagaagttgttggttatgctgaaacatctatgaatcgtcgtaagtacattcttcat
tattttggagaagattttgatgaaaagaatggggaaggggcagatatggatgataataca
agaaaccctaaaaagaagcatgaggcacaagaagatgttgtaaagttattatcagtagtt
agagacactaatgagaagtataaggcaaaggagattgtaaatactttgataggaaaagag
aatgcgatgttgaaatctcataggactcctagtcaaccattttttggaattggaaaagat
aaagatggaaagtattggatggcattgatacgtcaggttttagttgttaattacttaaga
aaagaaatagagcaatatggtgtactgaaaataacagcaaaagggaaagagtacattgat
aatccgagctcttttatgatgacaaaagatcatatttataatgattcggatgatggaaca
ataattaccaatgccaaatctactgctatttctgatgataaattagttaagttacttaaa
gatttacgtaaaaaagtagcagtaaaacaaggagttcctccttttgctgtttttcaagat
ccctcaatagacgatatggctttaaaataccctatgactttagaagaattatctaaagtg
catggtgtaggagaaggaaaagcgcgtaagttcgggaaagattttataaaattaataaca
gcttatgtagaagagaatgatattatacgtcctgatgatttaattgtaaaaagtacaggc
gttaattcaggtttaaaattgtatatcattcagaatactgatagaaaattaccattaaat
gatatcgcgcagtctaaaggtcttgaaatggaggagcttataaaggagatggaagctatt
attttctcaggaacgaagttgaatatagattatgcaatagatgatattttagatgaagat
cagcaagaagagatttatgattatttcatggaagctgagacagataaaattcaagatgcc
ttagatgaatttgatggagattatgatgatgaagaattgcgtttaatgcgtattaagttt
acaaatgaagtagctaattag
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