Tenacibaculum maritimum: MARIT_2345
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Entry
MARIT_2345 CDS
T05240
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tmar
Tenacibaculum maritimum
Pathway
tmar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tmar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MARIT_2345 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmar03021
]
MARIT_2345 (rpoA)
03400 DNA repair and recombination proteins [BR:
tmar03400
]
MARIT_2345 (rpoA)
Enzymes [BR:
tmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MARIT_2345 (rpoA)
Transcription machinery [BR:
tmar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MARIT_2345 (rpoA)
DNA repair and recombination proteins [BR:
tmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MARIT_2345 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
SFZ83903
UniProt:
A0A2H1EBG4
LinkDB
All DBs
Position
complement(2514206..2515198)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILNFQKPDKVIMIESTDFSGRFEFRPLEPGFGLTVGNALRRVLLSSLEGFAITSLRID
GVEHEFSTIQGVVEDITEIILNLKQVRFKKQIEESDRESVSIAISGQEQLTAGDLQKFIS
GFQVLNPDLVICNMDKSVKINMELTIEKGRGFVPAEENKRAGAPLGTIFTDSIYTPIKNV
KYAVENFRVEQKTDYEKLVFDIDADGSINPKDALTEAAKILIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLIDMDLSVRALNCLKAAEVDTLGDLVSFNKSDLMKFRNFG
KKSLTELEELVINKNLNFGMDLSKYKLDRD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttaaattttcaaaaaccagataaagtaataatgatagaatctactgatttt
tcaggaagattcgaatttagacctttagaacctggctttggtctaacagtgggtaatgct
ctaagaagggtattattatcttcattagaaggtttcgctattacatcattgagaattgat
ggagttgagcacgaattctcaactatccaaggtgtcgtagaagacatcactgaaattatt
ttaaatttaaaacaagtacgttttaaaaagcaaatagaagaatctgatagagaaagtgta
tctatcgctatttctggtcaagagcaattaactgctggagatttgcaaaaatttatttca
ggatttcaagtattaaatccagatttagtaatctgtaatatggacaaatcggtaaaaatc
aatatggagttaaccatagagaaaggaagaggatttgttccagcagaagaaaacaagaga
gcaggagctccgttaggaactatttttacagactcaatttacacgccaattaagaatgta
aaatatgctgtagaaaactttcgtgtagagcaaaagacagattatgagaaattggttttt
gatattgatgcagatggttctatcaaccctaaagatgccttaacagaagctgctaaaatt
ttaattcatcactttatgttattctctgacgagcgtattactttagaagcggatgaaata
gcgcaaactgaaacatatgatgaagaatcattgcatatgcgtcagttattaaagactaaa
ttgatagatatggatttatctgttagggctttaaactgcttaaaagcggcggaagtagat
acattaggagatttagtatcttttaataaaagcgatttaatgaagtttagaaattttggt
aaaaaatcattgacagagttagaagagttagtgatcaataaaaacttaaattttggaatg
gatttaagtaaatataaattagatagagattaa
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