Tenacibaculum maritimum: MARIT_2777
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Entry
MARIT_2777 CDS
T05240
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tmar
Tenacibaculum maritimum
Pathway
tmar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MARIT_2777 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmar03019
]
MARIT_2777 (rhlE)
Enzymes [BR:
tmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MARIT_2777 (rhlE)
Messenger RNA biogenesis [BR:
tmar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MARIT_2777 (rhlE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
SFZ84499
UniProt:
A0A2H1ECZ4
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All DBs
Position
2993165..2994400
Genome browser
AA seq
411 aa
AA seq
DB search
MQFKELPLDTSILKAITEKRYHTATLVQQCAIPLILNKKNVIVTAQTGTGKTAAFALPII
NELLEEQNSEKGQKKIKALIVTPTRELAIQIDKNFNTYAKYTNLRTTAVFGGTSLAPQKD
LLNKGIDILTATPGRLIDLYKQGSINLNFVKTIVLDEADLMLDMGFISDVKKIEALCPPK
KQTLLFSATMPEKIIELTTAIIKNPERVIISPTETTSSNIGQLLYHLPKKNKTDLCLHLL
RNMIHGRIIIFRRTKFGVDKLTQTLLKNNYKVSSIHGDKTQAIRNKAIEDFKSKKATILI
ATDVAARGIDIPNVDAVINFDMPNIPETYVHRIGRTGRAGKSGISLSFCSPDEKLYIEHI
EALLQRTIKVINDHPYPLSKPKKIKKQPNTISKHKKGRKSSASKKKKKRWY
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttaaagagctacccttagacacatctattttaaaagcaattactgaaaaaaga
taccataccgctactctagtacaacagtgtgcaatcccacttatacttaacaaaaaaaat
gtaattgtaactgctcaaacaggtactggaaaaacagccgcttttgctttgcctattatc
aatgagctattagaggaacagaactcagaaaaagggcaaaaaaaaataaaagcgttgatt
gttacccctactcgagaactcgctattcaaattgacaagaactttaacacctatgcgaag
tacactaacctaagaactactgctgtttttggaggtacctcactagctcctcagaaagac
ctcttaaataaaggtatcgatattcttactgcaacacctggtaggttaattgatttatac
aaacaaggttctataaacctaaactttgtaaaaacaattgttttagatgaggctgactta
atgttagacatgggatttataagcgacgtaaaaaagatagaggccctttgccctcctaaa
aagcaaacgctactattttctgcaaccatgcctgaaaagataattgaattaactactgct
atcatcaaaaatcctgaaagagtcatcatttctccaacagaaactacttcttcaaatatt
ggtcagttactttatcatttgcctaaaaagaataaaacagacttatgtttacacctactc
cgcaacatgatacacgggcgcattattatttttcgtcgcacgaaatttggagtagataaa
cttacacaaacattgttaaaaaacaactataaagtaagtagtattcatggagataaaaca
caggctattcgtaacaaagctatcgaagattttaaatctaaaaaggctacgatcttaata
gctactgatgttgctgctagagggattgatattcctaatgtagatgctgttattaatttc
gatatgccaaacatacctgagacttatgttcatagaattggaagaactggtagggctgga
aaatctggtatctccttatcattttgtagccctgatgaaaaattatacatagagcatatt
gaagctttattacaaagaactattaaagttataaatgaccacccttatccattaagcaaa
cctaaaaaaataaagaaacaaccgaatactattagcaagcataaaaaagggcgcaaatca
tcagcctctaaaaaaaagaaaaaacgttggtactaa
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