Tenacibaculum maritimum: MARIT_2840
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Entry
MARIT_2840 CDS
T05240
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tmar
Tenacibaculum maritimum
Pathway
tmar03030
DNA replication
tmar03430
Mismatch repair
tmar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MARIT_2840 (dnaE)
03430 Mismatch repair
MARIT_2840 (dnaE)
03440 Homologous recombination
MARIT_2840 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmar03032
]
MARIT_2840 (dnaE)
03400 DNA repair and recombination proteins [BR:
tmar03400
]
MARIT_2840 (dnaE)
Enzymes [BR:
tmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MARIT_2840 (dnaE)
DNA replication proteins [BR:
tmar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MARIT_2840 (dnaE)
DNA repair and recombination proteins [BR:
tmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MARIT_2840 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
SFZ84632
UniProt:
A0A2H1ECR8
LinkDB
All DBs
Position
3053453..3057829
Genome browser
AA seq
1458 aa
AA seq
DB search
MYLIFDTETTGLPKSWNAPITDTDNWPRCIQIAWQLHDELGNLIEHNDFLIRPDGFNIPF
DAERIHGISTNLAEEQGISLTEGLELFNAVLKKAKFIVGQNVGFDVNIMGCEFHRLGVSN
NLTELPVLDTCTEHTAQMCQIPGGRGGKFKLPTLTELHHHLFGVGFGEAHNATADVEATT
RCFLELIRLRQYTEEALDVPSDYFEKYTEANPMPIKVIGLKHLNLKKESEKIRQRITQEK
GGETTINTSEGLAKLKDVQFAHLHNHTQYSVLQSTIQIGNIVKAAAKDHMSAVAMTDTGN
MMAAFHFVQEVLSHNKAAEAANKEAIEKGETPNAQILKPIIGCELNVCQNHTDKSQKDNG
YQIVLLAKNKNGYHNLAKMSSIAFVDGFYYIPRIDKEIIKKYKEDIIVLTGNLYGEIPSK
ILNVGETQAEEALLWWKQEFGDDLYIELMRHDQEDERVVNETLLKFATKHKIKTVATNNT
FYLEKEDANAHDILLCVKDGEKQATPKGRGRGYRYGLPNDEYYFKSSEEMKTLFADLPEA
IINIQEIVDKIAPFTLARDVLLPAFDIPQEFRDEKDNEDGGKRGENNFLRHLTYEGAKKR
YGEITESIRERLDFELEVIEKTGYPGYFLIVEDFIREARNMDVSVGPGRGSAAGSVVAYC
LWITNIDPIKYDLLFERFLNPERVSMPDIDIDFDDEGRGRVMDYVIKKYGANQVAQIITY
GTMAAKSSIRDTARVLDLPLFEADRIAKLIPGMKLKKIFSLDESGLKEKLRSEEIELVNE
LKRLSSGADLTAETINKARILEGSVRNTGIHACGVIITPDDITKFVPVSLAKDSDMYVTQ
FDNSVVESAGLLKMDFLGLKTLTLIKDTVKIVKARHNIDLDPENFPIDDLKTYELFQRGE
TVGIFQYESPGMQKYMRELKPTVFADLIAMNALYRPGPLEYIPSFIRRKHGDEEIEYDLP
AMEEYLKETYGITVYQEQVMLLSQKLADFTKGEADVLRKAMGKKQIAVLAKMKPKFVDQA
SANGHDPEKLEKIWTDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSNNM
NDIKSVSFFMEESKRMGLDVLGPDVNESYLKFSVNDQGAVRFGMAAIKGVGSGAVKAIID
ERQENGPYKSIFDVAKRIDLRAANKKAFEGLVLAGGFDSFTNTHRAQYYVTDEKGQTFLE
KAIRYGNKFQESQNSSQVSLFGEASEIELPEPIIPVCDTWGTMELLGKEKEVIGMYISAH
PLDDFKNELKFCNAVISNFKDDLKKYEGLNLSFAGILSDVQHRVSKMGKGWAMFTIEDYN
DSYEFRVFGEDYLKFKHYLVPNSFLFIKTTVQPGWVNKDGVRGEPRLKFTDFKLLHDIMD
EMCKKLTLKIPLHQLKENFIKDLQHLIVLNRGTQNLYFTIWDADEKIELNLPSRNTKVKI
SNEFLKALDEQFINYKLN
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgatttttgacacggaaacaactggtttaccaaaaagttggaatgctcctatt
actgatacagacaactggcctagatgtattcaaatagcatggcaattgcatgatgaatta
ggaaatttaattgagcataatgattttttaattcgcccagatggatttaatattcctttt
gatgcagaacgtattcatggtatttctacaaatctagcagaagaacagggtatttcttta
acagaagggctagaattattcaacgcggttttaaaaaaagcgaaatttattgtagggcaa
aatgtaggctttgatgtaaacattatgggctgtgaatttcatcgtttaggagtttctaat
aacttaacggaactacctgtattggatacttgtacggaacataccgctcaaatgtgtcaa
atacctggaggacgtggaggaaaatttaagcttcctacacttacggaattacatcatcat
ctttttggcgtagggtttggagaggcacataatgccacagcagatgttgaagctactaca
aggtgtttccttgaacttattcgtttaagacaatatacagaagaagcactagatgttcct
tctgattatttcgagaaatacactgaagcaaaccccatgcctattaaggttattggttta
aagcacctgaatttaaaaaaggagagtgaaaaaattcgccaaaggataactcaagaaaaa
ggtggagaaactactattaatacttctgaaggacttgctaaactaaaagatgttcagttt
gcccacctgcacaaccatacacaatattcagtattacaatctaccatacaaataggaaac
attgtaaaagcagctgccaaagatcatatgtccgctgttgctatgacagatactggaaat
atgatggctgccttccatttcgtacaagaagtattgagtcataataaagctgcagaagct
gccaataaagaagctattgaaaaaggagaaactcctaatgctcaaattttaaaacctatt
attggttgcgaactaaatgtttgtcaaaatcatactgataaaagtcaaaaagataatgga
tatcaaattgttttattagctaaaaataaaaatggataccacaacttagcaaaaatgtct
tctattgcgtttgttgatggattttattacatccctagaattgataaagaaattataaaa
aaatataaagaagatattattgttttaacaggaaatttatacggagaaattcctagtaaa
atattaaatgtaggagaaacgcaagcagaagaagcacttctttggtggaaacaagaattt
ggcgatgatctgtatattgaattaatgcgtcatgatcaagaagatgaaagggtcgtaaat
gaaacgctcttaaagtttgcaacaaaacacaagataaaaaccgttgctacaaacaatacc
ttttatcttgaaaaagaagatgctaatgcgcatgatattttactttgcgttaaagatggt
gaaaaacaagcaactccaaaaggaagaggaaggggataccgatacggacttcctaatgat
gagtattatttcaaatcttcagaagaaatgaaaacactctttgccgaccttcctgaagca
atcatcaatattcaagaaattgtagataaaatagcacctttcacattagctcgcgacgta
ctattgcctgcttttgatatcccacaagaatttagagatgaaaaagataatgaagatggc
ggtaagcggggagagaacaacttcttacgccatctaacttatgaaggtgctaaaaaacgc
tatggagaaattacggaaagtattagagaacgtttggactttgaacttgaagtaattgaa
aaaacaggatatccgggatatttcttaattgtagaagattttattcgcgaagcacgaaat
atggatgtttctgtgggaccaggaaggggatctgctgctggtagtgtagtagcatactgc
ttatggattacgaatattgatcctattaaatatgatcttctttttgagcgcttcctaaac
cctgaacgtgtatccatgcccgatattgatattgattttgatgatgaaggacgtggacgt
gttatggattatgtaattaaaaagtatggagccaatcaggtagcacaaattattacttat
ggtactatggctgctaaatcttctattagagatactgcgcgtgtattagaccttcctctt
tttgaggctgatcgaattgctaaattaattcctgggatgaaattaaaaaagattttttct
ctggatgaaagcggcctaaaagaaaagcttcgttctgaagaaattgagctcgttaatgaa
cttaaacgcctatctagcggagctgacttaacagcagaaacaattaataaagctagaata
ttagaagggtctgttagaaacacaggaattcatgcttgtggggttattattactcctgat
gatattactaaattcgtacctgtttctcttgccaaagactctgatatgtatgttactcag
tttgacaattctgttgtagaaagcgctgggttattaaaaatggatttcttaggattaaaa
acattaaccctaattaaagataccgttaaaattgtcaaagcaagacataatattgattta
gaccctgagaatttccctattgatgatcttaaaacgtatgagttgttccagagaggagaa
accgttggtatatttcaatatgaatctccaggaatgcaaaaatatatgcgagaactaaaa
cctactgttttcgctgatttaatcgccatgaatgctttatatagacctggtcctttagaa
tacattccttcatttattagaagaaagcatggagatgaagaaattgagtatgacttacct
gctatggaggaatacttaaaagaaacctatggcattacagtatatcaagagcaagtaatg
cttctgtctcaaaaactagctgattttactaagggagaagccgatgtattgcgtaaagct
atgggtaaaaagcaaattgcagtcttggctaaaatgaaacctaaatttgtagatcaagca
agtgctaatgggcatgatcctgaaaaattagaaaaaatatggacagactgggaagctttt
gcttcatatgcctttaataagtctcactctacttgttatgcttggattgcttatcaaaca
gcctatttaaaggcgcactatcctgctgaatatatggctgctgttctttctaataatatg
aatgacattaaatctgtttcgttttttatggaagaatcaaaacgcatgggactcgatgta
ttgggcccagatgtgaatgaatcttatttaaaattttcagtaaatgaccaaggagctgtt
cgctttggaatggcagctattaaaggagtagggtctggagctgtaaaggcaattattgat
gaacgacaagaaaatggcccctataaatctatctttgatgttgcaaaacgtattgatcta
cgagctgctaataaaaaagctttcgaaggactcgtacttgccggagggtttgattcgttt
acaaatacacatcgagcacaatattatgtaactgatgaaaaaggacaaactttcctggaa
aaagcaattcgttatggtaacaaattccaagaaagtcaaaattcatcacaggtttcttta
tttggagaagcttctgaaatagaattgcctgaacctataattcctgtttgtgatacttgg
ggtacaatggaactacttggtaaagaaaaggaagtaattggaatgtatatctctgcacat
cctttagatgattttaaaaatgaactaaaattttgcaatgctgtcatctccaattttaaa
gatgatttaaaaaagtatgaaggactaaacctctcttttgctggtattttatcagatgta
caacaccgcgtatctaaaatgggaaaaggctgggccatgtttactatagaagactataat
gatagctacgagtttagagtgtttggagaagattacttaaaatttaagcactatttggtt
ccaaattctttcttatttataaaaactaccgtacaaccagggtgggttaataaagatggg
gtacggggagaacctcgattaaaatttactgattttaagttattacatgacatcatggat
gaaatgtgtaaaaaactaaccctaaaaattccactgcaccaattgaaagaaaattttatc
aaagacttgcagcacttaattgttttaaacagaggaactcaaaacttgtattttaccatt
tgggatgctgacgaaaaaattgaattgaacctccccagtagaaatactaaagttaaaatt
tcaaatgaatttttaaaagccctagatgagcagtttattaattataaattaaattaa
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integrated database retrieval system
