Thioflavicoccus mobilis: Thimo_0076
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Entry
Thimo_0076 CDS
T02397
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tmb
Thioflavicoccus mobilis
Pathway
tmb03420
Nucleotide excision repair
tmb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Thimo_0076
03430 Mismatch repair
Thimo_0076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmb03400
]
Thimo_0076
Enzymes [BR:
tmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Thimo_0076
DNA repair and recombination proteins [BR:
tmb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Thimo_0076
MMR (mismatch excision repair)
Other MMR factors
Thimo_0076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AGA88952
UniProt:
L0GT19
LinkDB
All DBs
Position
73576..75741
Genome browser
AA seq
721 aa
AA seq
DB search
MEHLSDILDPLNPAQREAVTTEAGNRLVLAGAGSGKTRVLVHRIAWLIRAEGVPPWSILA
VTFTNKAAREMKERIEAILGVPIGGMWVGTFHGLAHRFLRAHWQDAGLPAQFQILDADDQ
YRLVRRTLKALELDEAYWPPRQAVGFINKQKDEGWRAEHLDDEGDPHRRRMIAVYREYQA
ACERGGMVDFAELLLRAHELLRERAEIRRNYQERFNHILVDEFQDTNAIQYAWLRLLAGP
RDNLFLVGDDDQSIYGWRGARVENIQTFQKDYANTRVVRLEQNYRSTGTILGAANALIAH
NQTRLGKNLWTDGKAGEPIHRYAAFNEIDEARFVVERIRRYLADEGYRRCECAILYRTTA
QSRLFEEALIQAQIPYRVYGGQRFFERAEIRDALAYLRLIANPDDDAALERVINTPTRGI
GVRTVDQLRVQAREARVSLWRAVGDLLAAGAFASRTAGALQRFVDLISAQREAADGLSLA
DLAATVITAVELPEFYLKAKDGRGQDRVENLEQLIETATRFEQEVEDEETGRLATFLSHA
ALEAGEAQGDPEVDSVQLMTLHSAKGLEFPIVFLAGMEEGLFPHSLSSEDPRRREEERRL
CYVGMTRAMRHLYLTHAEKRRLHGSETHPFPSRFLREIPGDLVEEVRGGGVVRPTATAAA
PGSRAEAGGLALGQRVIHPKFGEGIVLDSEGSGSKTRVQVNFASAGTKWLVLAYARLEPL
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggaacacctctccgatatcctcgatcccctcaatccggcgcagcgcgaggcggtcacg
accgaggccggcaaccggctggtgctggccggggctggcagcggtaagacgcgcgtcctg
gtccaccgtatcgcctggttgatccgcgccgagggggtgccgccctggtcgatcctggcc
gtcaccttcacgaacaaggcggcgcgcgagatgaaggagcgcatcgaggcgatcctcggc
gtgccgatcggcggcatgtgggtcggcacctttcacggcctggcgcaccgtttcctgcgg
gcccactggcaggatgccgggctgccggcgcagttccagatcctcgatgccgacgaccag
taccggctcgtgcggcgcaccctgaaggccttggagctcgacgaggcgtattggccgccg
cgccaggcggtgggtttcatcaacaagcagaaggacgagggctggcgtgccgaacacctc
gacgacgagggcgatccgcaccggcgccggatgatcgccgtctatcgcgagtaccaggcg
gcctgcgagcgcggcggcatggtcgacttcgccgaactgctgctgcgcgcccacgagctg
ctgcgcgaacgcgccgagatccgtcgcaactaccaggagcgtttcaaccatatcctggtc
gacgagtttcaggacacgaacgcgatccaatatgcctggctgcgtctgctcgccgggccg
cgcgacaacctgttcctggtcggcgacgacgaccagtcgatctacggctggcgcggtgcc
cgggtcgagaatatccagaccttccagaaggactatgccaatacccgggtggtccgcctg
gagcagaattaccgctcgaccggcaccatcctcggcgccgctaacgccctgatcgcccac
aaccagacgcgtctcggcaagaacctctggaccgacggcaaagccggcgagccgatccac
cgctacgccgccttcaacgagatcgacgaggcgcgcttcgtcgtcgagcgcattcgccgc
tatctggccgatgagggctatcgccgctgcgagtgcgcgatcctctaccgcaccacggcc
cagtcacggctcttcgaggaggccctgatccaggcccagatcccctatcgcgtctacggg
gggcagcgtttcttcgagcgcgccgagatccgcgacgcgctggcctatctgcgcttgatc
gccaacccggacgacgacgcggcccttgagcgggtcatcaacaccccgacccgcggcatc
ggtgtgcgcaccgtcgaccagctccgcgtgcaggcccgcgaggcgcgggtctcgctgtgg
cgtgccgtcggtgacctgctcgccgccggcgccttcgcgtcccgcacggcaggtgcgttg
cagcgtttcgtcgatctgatctcggcccagcgagaggccgccgatgggctgtcgctggcc
gacctggcggcgaccgtgatcacggcggtggagctccccgagttctacctgaaggccaag
gacggcagggggcaggatcgggtcgaaaacctggagcagctcatcgagaccgccacccgt
ttcgagcaggaggtggaggacgaggagacgggccggctcgccaccttcctgtcgcacgcc
gcgctcgaggccggcgaggcccagggcgacccggaggtcgacagcgttcagctcatgacc
ctgcacagcgccaagggcctggagtttccgatcgtcttcctggcgggcatggaggagggc
ctgttccctcatagcctgtcgagcgaggacccgcgccgtcgtgaagaggagcgccggctc
tgctacgtcggcatgacccgcgcgatgcgccacctctacctgacccatgccgagaagcgc
cgcctgcacggcagcgagacccatcccttcccgtcgcgcttcctgcgcgagatcccgggg
gacctggtcgaggaggttcgtggtggtggcgtcgtgcgtccgacggcgacggctgccgcc
cccgggtcgagggccgaggccggcgggctggcgctcggccagcgggtgattcatccgaag
ttcggcgaggggatcgtgctcgacagcgagggttcgggctcgaagacccgcgtccaggtc
aatttcgcgagcgctgggaccaagtggttggtcctggcctacgcccggctggagccgctc
ggctga
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