Thioflavicoccus mobilis: Thimo_0216
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Entry
Thimo_0216 CDS
T02397
Name
(GenBank) WD40 repeat-containing protein
Organism
tmb
Thioflavicoccus mobilis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Ge1_WD40
Beta-prop_SCAP
NNH6
Beta-prop_RIG_2nd
PQQ_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Pentapeptide
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Vgb_lyase
Pentapeptide_4
Pentapeptide_3
NACHT
TIR_2
NPHP3_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AGA89088
UniProt:
L0GQS5
LinkDB
All DBs
Position
complement(224667..229424)
Genome browser
AA seq
1585 aa
AA seq
DB search
MDATEPDSIRASLEALLPTLTPANRERLAKLLTLLDGDRVALGTVLATLFPEAASEARAL
ADLRQFLNRLREAARNTGQPIQVSSGNKKAPIEERDLWFHVQRLLDERIAGFSRAAADLN
TDELVAQKAHVVPPRRQVRVLIDFAGADEALARRLIGELRAQLAIAKDYAFEVWSALDLR
AGEDGEATRSRAIERSDLAILLLSPAYLAERSTAVGALRDRAIVPVRLDEVDPARHAMSG
LDKLVPFPRAGAAYARTTKRRDFASKLFEEICELTEGKKLGRRQPVEEPALDAAREPPPP
RGQALLPEPDVPPEQTEHSFARRVELKTLGMPAASETARDDGVVALDYLMEWLQDPHGPP
YAAVLGEYGMGKTVLCQTLTLRLLDERRADPALPEPLYFDFRNLKSRPEVARSNLPRILD
ELIRNNWKIGAPDAGFDHREVFDLAQRRGGLVIFDGLDEVLVYLSEAEGQQFVRELWRLL
PPAAWRRSKTEPAPAEARPGRLILSCRTHYFKRFRDEVAFYRGEHREDLTDAQYRALILL
PFTEEQIRSYLAKSLGPEAGAAAFATLSRFHDLTDLARRPFNLALIRRHIQALEERRLAR
GRLQVVDFYDELVESSLDRDNAKHQIRPEHKRWLMQHLAAEVWRSGRATWSIGEVETWRK
GVFRAHPDLAEDYAAVTADQLNEDLRTATFIVRAGDDGFRFAHTSLQEYFLAGFLCGALV
EGDAAAWQIAMPSRETLDFLGQLLEAAPNDQALDGLNAIRRAYRPQASELAVAYLLQARE
RDHPTIPLAGFQLQGAQLAGTRFVGDDNLPLNLAGADLSGADLRDAWFEHVNLDGCRFQE
AHLDRARFSQCRLRSADLRDAEMPGAWLRRCDLTGTAVDQARTHRTWLIRCGGTAADGSN
GPPALRLTGAEPEALAGRPTEAQLRSFAGHVGEVNAVAWSPDGARLASAGNDGSLRLWDA
ASGAPLWLARGHEGSVLSCAFSPDGARLASAGSDGSLRLWDAASGAPLWLARGHEGSVSS
CAFSPDGARLASAGSDGSLRLWDAASGAPLWLARGHEGSVWSCAFSPDGARLASAGYDGS
LRLWDAASGAPLWLARGHEGSVWSCAFSPDGARLASAGYDGSLRLWDAASGAPLWVARGH
EGSVSSCAFSPDGARLASAGSDGSLRLWDAASGAPLWLARGHKGSVWSCAFSPDGARLAS
AGSDGSLRLWDAASGAPLWLARGHEGSVWSCAFSPDGARLASAGSDGSLRLWDAASGAPL
WLARGHEGSVWSCAFSPDGARLASAGSDGSLRLWDAASGAPLWLARGHEGWVWSCAFSPD
GARLASAGSDGSLRLWDAASGAPLWLARGHEGSVWSCAFSPDGARLASAGSDGSLRLWDA
ASGAPLWLARGHEGSVSSCAFSPDGARLASAGSDGSLRLWDAASGAPLWLARGHKGSVWS
CAFSPDGARLASAGSDGSLRLWDAASGAPLWLARGHEGSVSSCAFSPDGARLASAGDDGS
LRLWEAANGHPLRVYAMEPGGHAVWDVSDNRLLAAAGDAWLWLGWQVRDPATGALDHWPL
EALTDLPEPGGAHRSRPLASSTDRD
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgaccgaacccgactcgatccgagcctccctcgaggccctgctgcccaccctg
acgccggccaaccgcgagcggctcgcgaagctcctgaccttgctcgacggggaccgggtc
gccctcggcaccgtgctcgcgaccctgtttcccgaggccgcaagcgaggcgcgcgccctg
gccgacctgcgccagttcctcaaccggctgcgcgaggcggcccgcaataccggccagccg
atccaggtcagcagcggcaacaagaaggccccgatcgaggaacgggacctctggttccac
gtacagcgtctcctcgacgagcggatcgccggcttctcccgggccgcggccgacctgaac
acggacgagctggtcgctcagaaggcccatgtggtcccgccacggcgccaggttcgcgtc
ctgatcgatttcgccggcgccgacgaggcgctggcgcggcgcctgatcggcgagctgcgc
gcgcagctcgccatcgcgaaggactacgccttcgaggtctggtctgcattggacctgcgg
gccggcgaggacggtgaagcgacccggtcgcgcgcgatcgagcgcagcgatctcgcgatc
ctcctgctgagcccggcctatctcgccgagcggtcgaccgccgtcggcgcgcttcgggac
cgcgcgatcgtgcccgtgcgcctggacgaggtcgatccggcgcgccacgccatgtcgggg
ctggataagctcgtcccctttccacgagcgggcgcggcctatgcgaggacaaccaagagg
cgagacttcgcctcgaagctgttcgaagagatctgcgagctgaccgaaggaaaaaagctt
ggccgccggcagcctgtcgaagaaccggccctcgatgccgcccgcgaaccgccaccaccg
cgcggccaagccctgctcccggagcctgacgtgccgcccgagcagaccgagcacagtttc
gcccgccgcgtggagctgaagaccctcggcatgccggccgcgtccgaaacggcccgggac
gacggcgtcgtcgccctcgactacctgatggaatggctgcaggatccgcacggcccgccc
tacgccgcggtgctcggcgagtacggcatgggcaagacggtgctctgccagaccctgacc
ctgcgcctgctcgacgagcgccgggccgatccggcgctccccgagccgctctacttcgac
ttccgcaacctcaagtcccgccccgaggtggcccgctccaacctgccgcgcatcctcgac
gagctgatccgcaacaactggaagatcggcgccccagatgccggcttcgaccaccgggag
gtcttcgacctggcccagcgccgcggcgggctggtgatcttcgacggcctcgacgaggtc
ctggtctatctcagcgaggccgagggccagcagttcgtccgcgagctctggcgcctgctg
ccgccggcggcctggcgacggtcgaagaccgagccggcgccggccgaggcgcgcccgggc
cgcctgatcctgtcctgccggacccactacttcaagcgcttccgcgacgaggtcgccttc
taccgcggcgagcaccgcgaggacctgaccgacgcccagtaccgcgccctgatcctgctg
cccttcaccgaggagcagatccgcagctacctggcgaagtcgctcgggccggaggccggc
gccgcggccttcgcgaccctgagccgcttccacgacctgacggacctcgcccgccgcccc
ttcaacctggcgctgatccgccggcacatccaggccctggaggagcgccggctggcccgc
ggccgcctccaggtcgtcgacttctacgacgagctggtcgagtcgtcgctcgaccgggac
aacgccaagcaccagatccgccccgagcacaagcgctggctgatgcagcacctggcggcc
gaggtctggcgctcgggccgggcgacctggtcgatcggcgaggtcgagacctggcgcaag
ggcgtcttccgcgcccacccggacctggccgaggactatgccgccgtcaccgccgaccag
ctcaacgaggacctgcgcacggcgaccttcatcgtccgcgccggcgacgacggcttccgc
ttcgcccacacctcgttgcaggaatacttcctcgccggcttcctctgcggcgccctggtc
gagggcgacgccgcggcctggcagatcgccatgccgagccgcgagaccctcgactttctc
ggccagttgctcgaagccgcccccaacgaccaggccctggacgggctcaatgcgatccgc
cgcgcctatcggccgcaggccagcgaactggcggtcgcctacctgctccaggcgcgcgag
cgagaccacccgacgatcccgctggccgggttccagctccagggcgcccagctcgccggc
acccggttcgtcggcgacgacaacctgccgctgaacctggcgggggctgacctctcgggc
gccgatctccgcgacgcctggttcgaacacgtgaatctggacggctgccgattccaagag
gcccacctcgaccgcgcccgcttcagccaatgccggctgcggtcggccgatctccgcgac
gccgagatgccgggcgcctggctgcgccgctgcgacctgaccggcacagcggtcgaccag
gcccgcacccaccggacctggctgattcgctgcggcggcacggccgcggacggctcgaac
ggcccgcccgcgctgcggctgaccggcgccgagcccgaggccctcgctggacgcccgacc
gaggcgcagctgcgatccttcgccggccacgtcggcgaagtgaacgccgtcgcctggtcc
ccggacggcgcccgcctcgccagcgccggcaacgacggctccctgcgcctctgggacgcc
gccagcggcgcgccactctggctcgcccgcggccacgagggctcggtgttgtcctgcgcc
ttcagccccgacggcgcccgcctcgccagcgccggctccgacggctccctgcgcctctgg
gacgccgccagcggcgcgccgctctggctcgcccgcggccacgagggctcggtgtcgtcc
tgcgccttcagccccgacggcgcccgcctcgccagcgccggctccgacggctccctgcgc
ctctgggacgccgccagcggcgcgccgctctggctcgcccgcggccacgagggctcggtg
tggtcctgcgccttcagccccgacggcgcccgcctcgccagcgccggctacgacggctcc
ctgcgcctctgggacgccgccagcggcgcgccgctctggctcgcccgcggccacgagggc
tcggtgtggtcctgcgccttcagccccgacggcgcccgcctcgccagcgccggctacgac
ggctccctgcgcctctgggacgccgccagcggcgcgccgctctgggtcgcccgcggccac
gagggctcggtgtcgtcctgcgccttcagccccgacggcgcccgcctcgccagcgccggc
tccgacggctccctgcgcctctgggacgccgccagcggcgcgccgctctggctcgcccgc
ggccacaagggctcggtgtggtcctgcgccttcagccccgacggcgcccgcctcgccagc
gccggctccgacggctccctgcgcctctgggacgccgccagcggcgcgccgctctggctc
gcccgcggccacgagggctcggtgtggtcctgcgccttcagccccgacggcgcccgcctc
gccagcgccggctccgacggctccctgcgcctctgggacgccgccagcggcgcgccgctc
tggctcgcccgcggccacgagggctcggtgtggtcctgcgccttcagccccgacggcgcc
cgcctcgccagcgccggctccgacggctccctgcgcctctgggacgccgccagcggcgcg
ccgctctggctcgcccgcggccacgagggctgggtgtggtcctgcgccttcagccccgac
ggcgcccgcctcgccagcgccggctccgacggctccctgcgcctctgggacgccgccagc
ggcgcgccgctctggctcgcccgcggccacgagggctcggtgtggtcctgcgccttcagc
cccgacggcgcccgcctcgccagcgccggctccgacggctccctgcgcctctgggacgcc
gccagcggcgcgccgctctggctcgcccgcggccacgagggctcggtgtcgtcctgcgcc
ttcagccccgacggcgcccgcctcgccagcgccggctccgacggctccctgcgcctctgg
gacgccgccagcggcgcgccgctctggctcgcccgcggccacaagggctcggtgtggtcc
tgcgccttcagccccgacggcgcccgcctcgccagcgccggctccgacggctccctgcgc
ctctgggacgccgccagcggcgcgccgctctggctcgcccgcggccacgagggctcggtg
tcgtcctgcgccttcagccccgacggcgcccgcctcgcgagcgccggcgacgacggctcc
ctgcgcctctgggaggccgcgaatggacacccgttgcgcgtctacgcgatggagccgggc
ggccatgccgtctgggacgtgtcggacaaccggctcctcgcggccgccggcgacgcctgg
ctctggctcggctggcaggtgcgcgacccggcgaccggcgccctggaccactggccgctg
gaggccctgaccgacctgcccgagccgggcggcgcccatcgcagccgaccgctggcctcc
tccacggaccgcgactag
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