Thioflavicoccus mobilis: Thimo_0707
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Entry
Thimo_0707 CDS
T02397
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tmb
Thioflavicoccus mobilis
Pathway
tmb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Thimo_0707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmb03019
]
Thimo_0707
03016 Transfer RNA biogenesis [BR:
tmb03016
]
Thimo_0707
Enzymes [BR:
tmb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Thimo_0707
Messenger RNA biogenesis [BR:
tmb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Thimo_0707
Transfer RNA biogenesis [BR:
tmb03016
]
Prokaryotic type
tRNA degradation factors
Thimo_0707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
OB_RRP5_4th
KH_2
S1_RRP5
S1_TP0910
KH-I_KHDC4-BBP
Bac_luciferase
DUF2694
S1_2
KH_KhpA-B
OB_PDCD11
KH_SLS1_2
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
AGA89546
UniProt:
L0GU97
LinkDB
All DBs
Position
768117..770312
Genome browser
AA seq
731 aa
AA seq
DB search
MCAPLLSCAIEPPALAARDQSSPEDKPVIPTPIRKTFQYGSQTVTLETGEIARQADGAVL
VNMDDTVVLVTVVVAKKVGVARDFLPLTVEYQEKTYAAGRIPGGFFRREGRPSEAEILTA
RLIDRPIRPLFADGFTNEVQVIATVKSLNTSVNPEVPAMIGASAALAISGVPFNGPIGAV
RVGYKDGEYILNPAMVGLGPDSDLDLVVAGTENAVLMVESEARGLSEDVMLGAVLFGHEQ
MQVAIQAIRELAAEAGKPPMDWSPAESDVELTEAVAAACAERIAEAYRIVEKLERYQALD
AIRAEVVAGLCGGEAPQWTEPQVTGAIESLEKKTVRAAILAGQPRIDGRDNRTVRPITIR
VGVLPRTHGSALFTRGETQAMVVTTLGTERDSQIIDALGGERREHFMLHYNFPPFCVGEI
GRVGSPKRREIGHGRLAKRGVLAVMPGIDEFPYSVRVVSEITESNGSSSMASVCGTSLSL
MDAGVPVKAAVAGVAMGLIKEGEQFAVLTDIMGDEDHLGDMDFKVAGTMDGINALQMDIK
IEGITKEIMEVALGQAKEGRLHILGEMGKVIEGHRSEMSEHAPRIIELKIHPEKIRDVIG
KGGATIRAMTEETGATIDISDDGLVKIFSVDKSAGEEAKRRIRLITADVEVGKIYEGKVV
RLMDFGAFVQILPGRDGLVHISQISEERVQKVSDKLAEGDVVRVKVLEVDKQGRIRLSMK
AVEPQDGGLAS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcgccgctgctctcatgcgccatcgagccgccggcccttgccgcccgcgaccag
tcatcccctgaggacaagcccgtgatcccaacacccatccgcaagacatttcaatacggc
agccaaaccgtgaccctcgagacgggggagatcgcccgccaagccgacggcgcggtcctg
gtcaacatggacgacaccgtggtcttggtgaccgtggtcgtcgccaagaaggtcggcgtc
gcccgcgacttcctgccgctgaccgtcgagtaccaggaaaagacctatgcggccgggcgc
atcccgggcggtttcttccgccgcgaggggcgcccgagcgaggccgagatcctgaccgca
cgcctgatcgatcggccgatccgccccttgttcgccgacggcttcaccaatgaggtacag
gtcatcgcgaccgtcaagtcgctgaacacctcggtcaatccggaggtcccggcgatgatc
ggtgcatcggcggcgctggccatttcgggggtcccgttcaacggcccgatcggcgccgtt
cgggtcggctacaaggacggcgagtacatcctcaacccggcaatggtcggtctggggccc
gacagcgacctggatctggtcgtcgccggtaccgagaacgcagtgctgatggtcgagtcc
gaggcccgcggcctgtccgaggacgtcatgctcggggccgtgctgttcgggcacgagcag
atgcaggtggcgatccaggcgatccgcgagctggccgccgaggccggcaagccgccgatg
gactggagcccggccgagtccgatgtcgagttgaccgaggcggtcgcggcggcctgcgcc
gagcgcatcgccgaggcctaccgcatcgtggagaagctcgagcgctatcaggccctcgat
gcgatccgcgccgaggtcgttgccggcctctgcggtggcgaggcgccgcagtggaccgag
cctcaagtgacgggggcgatcgagtcgttggagaagaagacggtgcgcgccgcgatcctc
gccggtcagccgcgcatcgatgggcgcgacaaccgcaccgtgcgcccgatcacgatccgc
gtcggcgtcctgccgcgcacccacggttcggcgctcttcacccgcggcgagacccaggcc
atggtcgtgacgacgctcggtaccgagcgcgactcgcagatcatcgacgccttgggcggc
gagcggcgtgagcacttcatgctgcactacaatttcccgcccttctgcgtcggggagatc
ggccgcgtcggcagtccgaagcggcgcgagatcggccacggccgcctcgccaagcggggt
gtcctggcggtgatgccgggcatcgacgagttcccctattcggtgcgcgtggtctccgag
attaccgagtcgaacggctcgagctcgatggcgagcgtctgtggcaccagcctgtcgctg
atggatgccggcgtgccggtcaaggccgccgtcgccggtgtcgcgatggggctgatcaag
gagggtgagcagttcgcggtgctgaccgacatcatgggcgatgaagatcacctcggtgac
atggacttcaaggtcgccggcacgatggacggcatcaacgccctgcagatggacatcaag
atcgaaggcatcacgaaggaaatcatggaggtcgcgctgggtcaggccaaggaagggcgg
ctgcatatcctcggcgagatgggcaaggtcatcgaggggcatcgctccgagatgtccgag
cacgccccgcggatcatcgagttgaagatccaccccgagaagatccgcgacgtcatcggc
aagggcggcgcgacgatccgcgccatgaccgaggagaccggtgcgaccatcgacatcagc
gacgacggcctggtcaagatcttctcggtcgacaagtcggccggcgaggaggccaaacga
cgcatccgtctgatcaccgccgacgtcgaggtcggcaagatctacgagggcaaggtggtg
cggctgatggacttcggcgccttcgtccagatcctccccggtcgcgacggcctggtgcat
atctcccagatctccgaggaacgggtgcagaaggtcagcgacaagctggccgagggcgac
gtagtgcgggtcaaggtgctcgaggtcgacaagcagggccgaatccggctcagcatgaag
gcggtggagccgcaggacggggggcttgccagctag
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