Thioflavicoccus mobilis: Thimo_1245
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Entry
Thimo_1245 CDS
T02397
Name
(GenBank) ribosomal RNA small subunit methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
tmb
Thioflavicoccus mobilis
Brite
KEGG Orthology (KO) [BR:
tmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tmb03009
]
Thimo_1245
Enzymes [BR:
tmb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
Thimo_1245
Ribosome biogenesis [BR:
tmb03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Thimo_1245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
Methyltr_RsmF_N
Methyltransf_25
FtsJ
Methyltransf_5
Methyltransf_37
MTS
Motif
Other DBs
NCBI-ProteinID:
AGA90042
UniProt:
L0GW38
LinkDB
All DBs
Position
complement(1349614..1350999)
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AA seq
461 aa
AA seq
DB search
MTNALAERTGQAVPPTAGAEVRATAARVVQAVRSDGRSLTDALADLPAFTDGRDRALVQE
VCFGTLRTLPRLEALSGLLMHRPLQAADQDIAALILVGLYQLAEMRVPVHAAVAATVAAA
RILGKPRAAGFVNALLRRYLREQASLEARAARQPGVDGLFPQWLQDKLARAWPEHWPAIL
DASNAPPPMTLRVNRMRTSRKAYAETLAAAGLTARPVAGAPAALMLDAPVPVARLPGFAA
GLVSVQDSGAQLAAELLDAHPGERVLDACAAPGGKTAHLLERTANRIALTAIDMDPIRLA
RVHENLARLGLTAKAVVAADAGTLPQETTAEGSPPDWATQRYDRILLDVPCSATGVIRRH
PDIKWLRRASDLRPLAGQQTRILDAVWPLLEPGGRLLYTTCSLLPEENEDQIAAFLARHP
DAMEVPIEATWGLARRRGRQTLPTRRGPDGFYFALLGKAAA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgccttggctgagcggaccgggcaggctgtcccaccgaccgccggggccgag
gtccgcgccaccgcggcgcgcgtcgttcaagcggtgcgcagcgacggccgctcgttgacc
gatgcgctggccgacctgccggcattcaccgatggccgcgaccgggcactcgttcaagag
gtctgcttcggcaccctccgcaccctgccccgcctcgaggcgctgagcggtctgctgatg
catcgcccgttacaggcggcggaccaagacatcgcagccctcatcctcgtcgggctctac
cagctcgccgaaatgcgcgtaccggtccacgccgccgtcgccgcgaccgtcgccgccgcc
cgcatcctcggcaagccgcgtgcggctgggttcgtcaatgccctgttgcgccgttacctg
cgcgaacaggcctcgctcgaggcccgtgcggcgcggcagccgggcgtcgacgggctgttt
ccgcaatggctgcaagacaagctcgcgcgggcctggccggaacattggccggcaatcctc
gacgcgagcaatgcccccccgccgatgacgttgcgcgtcaaccggatgcgaacgagccgc
aaggcgtacgccgagacgctcgcggccgccggcctgaccgcccgcccggtggccggggca
cccgccgcgctgatgctcgacgcccccgtgccagtggcgcgcctgcccggcttcgccgcc
ggcttggtctccgtgcaggacagtggcgcccaactcgccgccgaattgctcgacgcccac
cccggcgagcgggtcctcgatgcctgtgccgcccccggcggcaagaccgcccacctcctc
gagcgcaccgccaaccggatcgcgctgacggccatcgacatggatccgatccgcctcgcg
cgggtgcacgaaaacctagcgcggctgggcctcacggccaaggccgtcgtcgccgccgac
gccggtacgctgccccaggaaacgaccgccgagggatcgccacccgactgggctacgcaa
cgctacgaccgcatcttgctggacgtgccctgctcggcgacgggcgtcatccgccgccac
cccgatatcaagtggctgcgccgggcaagcgacctgcgacccctcgccggccagcaaaca
cgcatcctcgatgccgtctggccgctcctcgaaccgggcggacggttgctctacaccacc
tgttcgttgctaccggaggagaacgaggaccagatcgcggccttcctggcccgtcacccg
gacgcgatggaggtgccgatcgaggcgacctggggacttgcccgccggcgcggccgccag
acgctaccgacccgccgcggtcccgacggcttctatttcgccctgctcggcaaggccgca
gcatga
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