Thioflavicoccus mobilis: Thimo_1256
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Entry
Thimo_1256 CDS
T02397
Name
(GenBank) DNA topoisomerase I, bacterial
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tmb
Thioflavicoccus mobilis
Brite
KEGG Orthology (KO) [BR:
tmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmb03032
]
Thimo_1256
03400 DNA repair and recombination proteins [BR:
tmb03400
]
Thimo_1256
Enzymes [BR:
tmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Thimo_1256
DNA replication proteins [BR:
tmb03032
]
Prokaryotic type
DNA Topoisomerases
Thimo_1256
DNA repair and recombination proteins [BR:
tmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Thimo_1256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Auto_anti-p27
Zn_ribbon_8
Zn_ribbon_3
HVO_2753_ZBP
DZR
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AGA90053
UniProt:
L0GTH7
LinkDB
All DBs
Position
1360869..1363253
Genome browser
AA seq
794 aa
AA seq
DB search
MNLVVVESPAKAKTIKKYLGPDFEVVASYGHVRDLVPKEGAVDPAHGFKMQYQVIDRNEK
HVQAIAKRLKAADALYLATDPDREGEAISWHLYELLRGRRQLGEKPVHRVVFHEITKRAI
QDAVANPRGLSVDLVNAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIVER
EQEIEAFVRREYWTIEADATKDAAKKNAKPFTAKLVEFAGEKVEQFTITDETRAGEVTRT
LEQAADGKLRVESVERKQRKRLPAPPFITSTLQQEAARKLGFTAQRTMRVAQQLYEGVDV
GGESVGLISYMRTDSVSLAQEALAEIRGYVAERYGEDHLPPQPRQYKTKAKNAQEAHEAI
RPTSIRREPTALKGHLSNDQLRLYELIWKRTLACQMAHALINTVAINLSAGAGNIFRATG
STVAEPGFMRVYLEGRDDERGADDDEERMLPPLAEGDLVDLLAIRPEQHFTEPPPRYSEA
TLVKALEEFGIGRPSTYASIISTLQEREYVHLEKKRFHPTDVGRVVNRFLTDYFASYVDY
DFTAKLEDELDAVSRGEEEWIPLLEQFWRPFKQRIDDTEVNVKRSDVTQERIDEPCPKCG
SPLSIRLGRHGRFIGCTNFPACDYTRDLGDAKAEPEAAEVVEGRSCPKCGSPLHVKRGKY
GRFIGCSAYPECKHIEPLERPEDTGVTCPKCGKGTLQKKKSRRGKVFYSCSTYPKCDYAI
WNEPIAQACPNCGWPILTRKVTRGKGEQIVCPQKECGYSASIEGGDDMGEADGKPSSGRN
KGQRAASAKDDATG
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggtagtcgtcgaatctcccgccaaggccaagaccatcaagaagtacctcgga
cccgatttcgaggtcgtggcctcctatggtcacgtccgcgatctggtgccgaaggagggc
gcggtcgaccccgcgcacggcttcaagatgcagtaccaggtcatcgaccgcaacgaaaag
cacgttcaggccatcgccaagcggctcaaggcggctgatgccctgtatctggcgaccgac
ccggaccgcgagggcgaggccatttcatggcacctctacgagctgctgcgcggccgccgt
cagctcggcgaaaagccggtgcatcgagtcgtcttccacgagatcaccaagcgcgccatc
caagacgccgtagccaacccgcgtggcctgtcggtcgacctggtcaacgcccagcaggcg
cgccgtgcgctcgactatctggtcggcttcaacctctcgccgctgctctggaagaagatc
cgccgcggcctctcggccgggcgcgtgcagagtccggcgttgcgcctgatcgtcgagcgc
gagcaggagatcgaggccttcgtccggcgtgagtattggacgatcgaggccgacgctacg
aaggacgcggccaagaagaatgccaagcccttcacggccaagctggtcgagttcgccggc
gaaaaggtcgagcagtttacgatcaccgatgagacgcgtgccggtgaggtgacacggacc
ctggagcaggccgccgacggcaagctcagggtcgagtcggtcgagcgcaagcagcgcaag
cgcctcccggcgccgcccttcatcacctcgacgctccagcaggaggccgcgcgcaagctc
ggctttacggcccagcgcacgatgcgcgtcgcccagcagctctacgaaggggtcgacgtc
ggcggcgagagcgtcggcctgatcagctacatgcgtaccgattcggtgagcctggcccag
gaggccctggccgagattcgcggctatgtcgccgagcgctacggcgaggatcacctgccg
ccgcagcctcgccagtacaagaccaaggcgaagaacgcccaagaggcgcacgaggcgatc
cgcccgacctcgatccgccgcgagccgacggccctgaagggccacctgagcaacgatcag
ctccgcctctacgagctgatctggaagcgcacgctggcctgtcagatggcccatgccctg
atcaacacggtcgcgatcaacctctcggccggtgccggcaacatcttccgcgccaccggc
tcgacggtcgccgagccgggcttcatgcgcgtctacctcgagggccgcgacgacgagcgc
ggcgccgacgacgacgaggaacgcatgctgccgccgctcgccgagggcgacctcgtcgac
ctgctggcgatccgccccgagcagcacttcaccgagccgccgccgcgctatagcgaggcg
acgctggtcaaggcactcgaggagttcggcatcggccggccctcgacctacgcgagcatc
atctcgacgctccaggaacgcgagtacgtgcacctggagaagaagcgcttccacccgacc
gacgtcggccgggtcgtcaaccgcttcctgaccgattacttcgcctcctacgtcgactac
gatttcaccgccaagctcgaggacgagctcgacgccgtctcgcgcggcgaggaggagtgg
atcccgctgctcgagcagttctggcggccgttcaagcagcgcatcgacgacaccgaggtc
aacgtcaagcgcagcgacgtcacccaggagcgtatcgacgagccctgccccaagtgcggc
tcgccgctgtcgattcgcctcggccggcatggccgcttcatcggctgtaccaacttcccg
gcctgcgactacacgcgcgatctcggcgacgccaaggccgagcccgaggccgcggaggtc
gtcgagggccgctcctgccccaaatgcggctcgccgctgcatgtcaagcgcggcaagtat
gggcgtttcatcggttgcagtgcctatccggagtgcaagcacatcgagcccttggagcgc
ccggaggacacgggcgtgacctgcccgaagtgcggcaaggggaccctgcagaaaaagaag
tcgcggcgcggcaaggtcttctattcctgttccacctatcccaaatgcgactacgcgatc
tggaacgagccgatcgcccaggcctgccccaactgcggttggccgatcctgacccgcaag
gtcacccgtggcaagggcgagcagatcgtctgcccgcagaaggaatgcggttacagcgcg
tcgatcgagggcggtgatgacatgggtgaggccgacggcaaaccgtcctctgggcgcaac
aaggggcagcgggcggcgagtgccaaggacgatgcgacaggctga
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