Entry |
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Name |
(GenBank) PAS domain S-box
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KO |
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Organism |
tmb Thioflavicoccus mobilis
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:tmb00001]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Thimo_1570
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Thimo_1570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:tmb02022]
Thimo_1570
02035 Bacterial motility proteins [BR:tmb02035]
Thimo_1570
Enzymes [BR:tmb01000]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.80 protein-glutamate O-methyltransferase
Thimo_1570
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.61 protein-glutamate methylesterase
Thimo_1570
Two-component system [BR:tmb02022]
CheA family
CheA-CheYBV (chemotaxis)
Thimo_1570
Bacterial motility proteins [BR:tmb02035]
Flagellar system
Chemotaxis proteins
Two component system proteins
Thimo_1570
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(1727384..1732933)
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AA seq |
1849 aa
MVEKDGREANSDRAEDKVSPTLEEAAPLGEGAQSSDSTDRETDATAEGHLIPEPRRSCVV
VGVGASAGGLSAFKRFLRSLPSDSGMAFVLIQHLDPSHESMMAELLSKYTTMPIVQIDEA
MPIEPNTVYMIQPNRFVKIEDNGLFVEAPVQRRGVRLPIDYFFSSLARARRERAICVVLS
GTGSDGADGLREVKGEGGMTIAQRTEDAEFDGMPSAAVATGAVDHVLAIEEMADAILAYS
RHAYVHNHSNGTLASAAPEHFRAILSLLNARTERDFSRYKHGTLARRIERRMGIRHIDSA
ADYLKLLRSDQEEVHALFKDLLIGVTRFFRDPAAWSELEHILAHQLRDRRSEEAVRVWVP
GCATGEEAYSIAMLLFELQERQNKRWDIQVFATDIDSDAIEAARFGLYSENIASDLTEAR
LTAFFQHDGNKLRVKKRLRETCVFAVQSLLSDAPFSNLDLISCRNLLIYLESDIQQRVLD
VFHFGLKPSGLLFLGNSESPNKRIRLFKTLSQPSRVYQKVGTSRPGSGGFPVVSTSRRCL
DTLPAKRDEQQSVALGAIERSKRALLEEFAPASVVVNYRGLIQYIHGPVRNYLDFPSGEP
ELELTTMTLEGLKAKTRSALHQARTSGETVSLVATRIQRDREETAVRIRAQPLPGGKGDD
RLFLVSFLDESPPQAADHSADADVPEAPAGLRGSDADEVNRQLVLELAATREDLQSTIEE
LESANEELKASNEEVMSMNEELQSTNEELETSREELQSLNEELSTVNSQLHDKVGELEAM
TNDLTNLLASTDVATLFLDEGLRIRRFTPATMRLMSLLDSDVGRPLSDLASRVDDPELAD
DARAVLQTLAPIQKEVSKGSSQWFMRRVTPFRTADNKIEGVVVTYSDVTGVKEAARHVEL
REQQQAAVAQFGRAALAGEDSEALLGRAAKMVVDTLEVDYVKVLRREPEGRDLRLVAGVG
WRNGLVGEATVSAGIESQGGYTLQTGGPVVTRDLRKEKRFSGSRLMSDHGILSGMSVLIG
PEEAPWGVLSAHARREIDFTVDDTNFMLSVANVLWEAIRREAVETALRANEARTAAFLNN
SAVVAWMKDGRGRYVYLSQTFEHRFGIRADDWLGRTDEELWPPEMAAAIHANDRRVREAN
EALETTETMVVRSGASVHLLVSKFPFTDALGRSCVGGLGVDITDRIEAERALTESEERLR
QAARMARFGTYYADVDEGVIYWSAELKEILGYPSDAALETAIGEVPGFVNEADRERVAAA
LTASLDPVGDGLLQEEYRVVRRDGEIRWLLMQGRTLFQGEGPARCPIQVTGTALDITERH
LFEEELRAARTRAEAANEAKSQFLANMSHEIRTPLTAILGFADVLQTRLCDPDDQACINT
IKRNGDHLRQILDDFLDLAKIEAGKLSVHAQPCDAVAIIVEIQSLYGARAAQKGLSLTFE
PRGELPRQIETDPKCLRQILLNLVGNAIKFTDTGGVQIVVECHAQDEQLAIAVIDSGIGI
EQSHLEAVFEAFEQLDKSMTRSAGGTGLGLSITKKLVRALGGEITAESEPEHGSTFHIRI
PTGPLAEAEWVIPDVTRLPTGAGGSPNEALPTLKARVLAVDDHRDVRFLVHELIENAGGE
VISASDGAQALAVWQREHGQGRTIDAVLIDIQMPGMDGLDTTRQLRAVGCRVPIIALTAN
AMQRDRDACLEVGCDDFLSKPIERAVLLKKLAGWLHQPLADRTDDEATLVVLCVDDDPDI
RATQKTLLELHGHRVEVAGSGAEALAVAERCKPSTALIDLGLGDMSGSELLEQLKRRPEL
ADCLYVCLSGQTEDEAAWRELGFDYYLQKPVGIAALTEVLRCAKPGTKE |
NT seq |
5550 nt +upstreamnt +downstreamnt
atggtcgaaaaagatggccgcgaggccaactcggacagagctgaagacaaggtgtcacca
acgctcgaagaggccgccccgctcggtgaaggcgcccagtcctccgattcgaccgaccgc
gagaccgacgccaccgccgaggggcacctgattcccgagccaaggcgcagctgcgtcgtc
gtcggcgtcggcgcctcggccggcggcctgagcgcgttcaagcgctttctgcgcagcctc
ccgagcgactccggcatggccttcgtgctgatccagcacctcgacccttcccacgagagc
atgatggcggagctgctctcgaagtacacgacgatgccaatcgtgcagatcgacgaggcg
atgccgatcgagccgaacaccgtgtacatgatccagccgaaccggttcgtcaagatcgag
gacaacgggctgttcgtcgaggcgccggtgcagaggcgcggcgtgcgcctgccgatcgac
tacttcttcagctcgctggcgcgggcgcgacgcgagcgggcgatctgcgtcgtcctctcc
ggcaccggcagcgacggcgccgacggcctgcgcgaggtcaagggcgagggcggtatgacg
atcgcacagcgaacggaggacgcggagttcgacggcatgccgagcgccgccgtcgccacc
ggcgccgtcgatcatgtgctcgcgatcgaggagatggccgacgcgatcctggcctacagc
cgccacgcctacgtccacaatcactcgaacggcaccctggccagcgcggcgcccgagcac
ttccgcgccatcctgagcctgctgaacgcccggaccgaacgtgacttcagccgctacaag
cacgggaccctcgcgcggcgcatcgagcggcgcatgggcatccggcacatcgacagcgcc
gccgactacctcaagctcctgcgcagcgaccaggaagaggtacacgccctgttcaaggac
ctgctcatcggcgtgacccgttttttccgcgatccggcggcctggagcgagctggagcat
atcctggcgcaccaattgcgcgaccgccgcagcgaggaggccgtgcgggtctgggtgccg
ggctgcgcgaccggcgaggaggcctattcgatcgcgatgctgctgttcgagctccaggag
cggcagaacaaacgctgggacatccaggtgttcgccaccgacatcgacagcgacgccatc
gaagctgcccgcttcggcctctactcggagaacatcgccagcgacctcaccgaggcgcgc
ctcacggccttcttccagcacgacggcaacaagctacgcgtcaagaagcgcctgcgcgag
acctgcgtcttcgcggtgcagagcctgttgtcggacgcgcccttctccaacctcgacctg
atcagctgccgcaacctactgatctatctcgagtcggacatccagcaacgggtgttggac
gtcttccacttcggcctcaaaccgagcggcctgctgtttctgggcaactcggagtcgccg
aacaagcggatcagactcttcaagaccctctcgcagccctcgcgggtctaccagaaggtc
ggcaccagccgcccgggcagcggcggcttccctgtggtgagcacgagccgccgctgcctc
gacacgctgcccgcgaagcgcgatgagcaacagagcgtcgcgctcggggccatcgagcgc
tccaaacgggccctactcgaggagttcgcgccggcgtccgtcgtcgtcaactaccgcggt
ctgatccagtacatccacggaccagtgcgcaactatctcgacttcccgagcggcgagccg
gagctggagctcaccacgatgacgctcgaggggctcaaggccaagacgcgcagcgccctg
catcaggcccgcacatccggggagacggtctcgctggtggcgacgcggattcagcgtgat
cgcgaggagaccgccgtgcgcatccgcgcgcagccgctgcccggcggcaagggcgacgat
cgactcttcctggtcagctttctcgacgagtctcccccacaggcggcagaccactcggca
gacgcggacgtcccggaggcgccggcaggcctccgggggagcgacgcggacgaggtcaac
cgccaactggtgctggaactcgcggcgacacgggaggacttgcagagcacgatcgaggag
ctcgagagcgcgaacgaggagctcaaggcctcgaacgaagaggtcatgtcgatgaacgag
gagctccagtcgacgaacgaggagctggagacctcgcgcgaggaactgcaatcgctcaac
gaggagctcagcacggtcaacagccagctacacgacaaggtcggcgagctggaggcgatg
accaacgacctgaccaacctcctcgcgagcaccgacgtggcgaccctgttcctcgacgag
ggcctgcgtatccgccgcttcacgccggcgaccatgcgcctgatgagcctgctcgacagc
gacgtcggccggccgctgagcgatctggcctcgcgcgtcgacgacccggaactcgccgac
gatgcccgtgccgtgctccaaaccctggcgccgattcagaaggaggtcagcaaaggctcc
tcacagtggttcatgcgccgcgtgacgcctttccggaccgcggacaacaagatcgaaggg
gtggtcgtcacctactcggacgtcaccggcgtcaaggaggcggcgcgacacgtcgagctg
cgcgagcagcagcaggcggccgtcgcccaattcggccgtgcggccctcgccggcgaggac
tccgaggcgttgctcggacgggctgcgaagatggtcgtggacacgctcgaggtcgactac
gtcaaggtgctgcgccgcgagcccgagggccgcgacctgcgcctggtcgccggtgtcggc
tggcgtaacggactggtcggcgaagcgaccgtctcggccggaatcgagtcccagggcggc
tacacgctgcagaccggcgggccggtcgtcacgcgcgacctgcgcaaagagaagcgcttc
agcggctcgcggctaatgagcgaccacgggatcctgagtggcatgagcgtcctgatcggc
ccggaagaggccccatggggcgtcctcagcgcccatgctaggcgcgagatcgacttcacc
gtcgacgacaccaacttcatgctgtcggtcgccaacgtgctctgggaggcgatccgccgc
gaggccgtggagacggcactgcgggccaacgaggcgcgcacggcagccttcctgaacaac
agtgccgtcgtcgcctggatgaaggacggtcggggccgctacgtctatctgagccagacc
ttcgagcaccgtttcgggatccgcgccgacgactggctcggccggacggacgaagagctc
tggccgccggagatggccgcggccattcacgccaacgatcgacgggtacgcgaggccaac
gaggccctggagacgaccgagaccatggtcgtccgcagtggggcgtcggtgcacttgctg
gtctccaagttccccttcaccgatgccctgggtcggtcctgcgtcgggggtctgggcgtc
gacatcaccgaccgcatcgaggccgagcgggcgctgacggagagcgaggagcgcctgcgc
caggcggcccgcatggcacgcttcggcacctattacgccgatgtcgatgaaggcgtcatc
tactggtcggccgaactcaaggagatcctcggctatccctcggacgcggcgctcgagacc
gccatcggcgaagtgcccgggttcgtgaatgaagccgaccgcgagcgcgtggccgccgcc
ctcaccgcgagcctcgaccccgtcggcgacggactgctgcaagaggagtaccgggtcgtg
cgccgcgacggcgagatccgctggctgctgatgcagggccggaccctgttccagggtgaa
ggtccggcgcgctgccccatacaggtcacaggtacggcgctggatatcaccgagcggcat
ctgttcgaggaggagctgagggccgcgcggacccgagccgaggcggcgaacgaggccaag
agccagttcctcgccaacatgagccacgagatccgcacgccgctgaccgcgattctgggc
ttcgccgacgtcctgcaaacgcgcctctgcgatcccgacgaccaggcctgcatcaacacc
atcaagcgcaacggcgatcacctgcgccagatcctcgacgacttcctcgacttggccaag
atcgaggccggaaagctcagcgtccacgcccagccctgcgacgcggtcgcgatcatcgtc
gagatccagtcgctctacggtgcccgcgccgcgcagaagggcttgtcgctgaccttcgag
ccacgcggcgagctgccgcgccagatcgagacggatcccaagtgcctgcgccagatcctg
ctcaacctggtcggcaacgcgatcaagttcaccgacaccggcggggtgcagatcgtcgtc
gagtgccacgcccaggacgagcaactcgcgattgcggtcatcgactccgggatcgggatc
gagcagagccatctcgaggcggtcttcgaggccttcgagcaactcgacaagtccatgacc
cgcagcgcaggcggcaccggcctcggcctgtcgatcacgaagaagctggtcagggcactc
ggcggagagatcacggccgagagcgagcctgagcacggctcgaccttccacataaggatc
ccgaccgggcccctcgccgaggccgaatgggtgataccggatgtcacgcggctccccacc
ggcgcaggcggatcaccgaacgaggcgctgccaacgctcaaggcgcgcgtgctcgccgtc
gacgaccatcgcgacgtccgcttcctcgtccacgagctgatcgagaacgccggcggcgag
gtcatctcggccagcgacggcgctcaggccctcgccgtctggcagcgcgagcatggccag
gggcgcaccatcgacgcggtgctgatcgacatccagatgccgggcatggacggcctcgat
acgacacggcagcttcgagcggtcggctgtcgcgtgcccatcatcgcgttgaccgccaac
gcgatgcaacgcgatcgtgacgcctgcctcgaggtcggctgcgacgatttcctgagcaag
ccgatcgagcgcgccgtgctgttgaagaaactggccggctggctgcatcagccgctggcc
gaccgcaccgacgacgaggcgacgctcgtcgtcctctgcgtcgacgacgaccccgacata
cgcgcgacccagaagaccctgctggagctacacggccatcgcgtcgaggtcgccggctcc
ggtgccgaggccctcgccgtcgccgaacggtgcaagccgagcaccgccctcatcgatctc
gggctcggcgatatgtcaggcagcgaactgctcgaacagctcaagcgccgccccgaactc
gccgactgcctgtacgtctgcctctccgggcagacggaagacgaagcggcatggcgggag
ctcggcttcgactactacctccaaaagccggtcggcatcgcggcactcaccgaggtgctg
cgatgtgccaaacccgggaccaaggaatag |