KEGG   Thioflavicoccus mobilis: Thimo_1592
Entry
Thimo_1592        CDS       T02397                                 
Name
(GenBank) Lhr-like helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
tmb  Thioflavicoccus mobilis
Brite
KEGG Orthology (KO) [BR:tmb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tmb03400]
    Thimo_1592
Enzymes [BR:tmb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Thimo_1592
    5.6.2.6  RNA 3'-5' helicase
     Thimo_1592
DNA repair and recombination proteins [BR:tmb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Thimo_1592
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII AbiEi_4 AAA_25 Lhr_WH
Other DBs
NCBI-ProteinID: AGA90372
UniProt: L0GX14
LinkDB
Position
complement(1761639..1766069)
AA seq 1476 aa
MFSPPTQTWLAEAFPAPTEIQRRGWAAIASGAHSLLIAPTGSGKTLAAFLAAIDACAALP
PNAPPGVRVLYVSPLKALVYDVERNLRAPLVGIGHAAARLGHPLRPVGVAIRTGDTPQTE
RQRQAKDPAEILVTTPESLFLILGANARETLRTVRTVIVDEIHALASTKRGTHLALSLER
LAELTEVDPQRIGLSATVRPAEEIARFLGGDRPVNIVDASTPPRLDLAVTVPVPDMEQVQ
APPRPERGGSILGELYAREVATPIPERGIWPAIYPQLLEQIRAHRATIVFVNSRGLCERL
TQRLNELAGEALVRAHHGSVSHAQRTEIEEALKQGRLRGIVATSSLELGIDMGAIEQVIL
VESPGSVARGLQRVGRAGHQVGAVSSGRIFPKFRGDLLECAVIAARMRRGEIEALRVPHS
PLDVLAQQIVAACTVAPRRVADLAALAARAHPYRELGRPILDGLIEMLAGHYPSDELAAL
RPLLAWDRSADLVTARRGAAMTVRMNAGTIPDRGQYAVRLGTDGPRLGELDEEMVFETRP
GENILLGATTWHVEEITRDAVLVSPAPGEPGKLPFWHGDGPGRPIELGRALGAFLRELAG
QGRAQAVDWLMREAPLDRYAAENLARYVFDQLEHTGALPTDRRITIERFRDELGDWRICL
LTPFGARVHAPLAMALQHRLASDGGHEVQVMYTDDGIVLRFADAEELPALAELLPDPDEI
DELVTTQLAETALFAGLFRENAARALLLPRRGPARRSPLWVQRLKAQELLAAVRRYPAFP
IVIETYRQALADVFDLAELKELLRAVRSRRIRVDEVETRSASPFARSLVFAYVAAYIYEQ
DAPLAERRAQALTLDRGLLAELLGQAELRELIDPGVLAELEAELQHLAEERRARDADELH
DLLRRLGDLSKPEIAARTRGDGRTWLEQLFAQQRAAAVRIAGEARSIAADEAALYRDALG
VVPPPGLPQAFLDPPPQPLAHLLRRFARCHGPFVTGEPAARYGLPPGAVEPVLRALEAEG
RLVRGELRPGGCEPEWCDAEVLRRLKRRTLARLRNAVAPVDAATLGRFLPDWHGLDGKRG
GPERLLEVIAQLEGLALPWSTLHSVILPRRVAGFAPEMLDMLAAAGEIVWIGRGPLGARD
GRIALYRRGRVARLLVPPPPPEDLEPLAVAILARLAERGASFLVELEEAARAAAPGATTA
ELEAALWDLVWAGRITNDTFAPLRYLGHARPRSQHGRWRPGRSLAGGRWSLVGGLVATPV
STTERALAQAEQLLERYGVVSREAAIAEDLPGGFGAVYRVLKELEETGRVRRGWFIEGLS
GAQFALPGALDRLRAARPAEDDLTDGAGETACILAAIDPANPWGALLPWPPTGGADGRPR
RVAGAWLITVGGLPSIYVAPGGRRIQTFPSPGDDDQALSSACEALHRLPRRRTLIVEQID
GVPARESPLAERLRACGFVDDYRGLAAEMGYSKEVG
NT seq 4431 nt   +upstreamnt  +downstreamnt
ttgttcagcccccctacccagacctggctcgccgaggcctttccggcgccgaccgagatc
cagcggcgcggctgggcggcgatcgcgagcggcgcacacagcctgctgatcgccccgacc
ggcagcggcaagacgctcgcggccttcctcgcggcgatcgatgcctgtgccgcgctgccg
cccaacgcaccgcccggggtgcgggtcctctacgtctcgccgctgaaggcgctggtctac
gacgtcgagcgcaatctgcgcgccccgctggtcggcatcggccacgcggcggcgcggctc
ggacacccactgcgcccggtcggggtcgcgatccgcaccggcgatacgccacagaccgag
cgccagcgccaggcgaaggacccggccgagatcctggtgacgacacccgagtcgctgttt
ctgatcctcggggccaatgcgcgcgagacgctgcgcacggtgcgcaccgtcatcgtcgac
gagatccacgcgctggcctcgaccaagcgcggcacgcacctggcgctgtcgctggagcgg
ctcgccgagctgaccgaggtggacccgcagcgcatcggcctgtcggcgaccgtgcgcccg
gccgaggagatcgcccgcttcctcggcggcgaccggcccgtgaacatcgtcgacgcctcg
acgccgccgcgcctcgacctcgccgtcacggtgcccgtgcccgacatggagcaggtccag
gcgccgccgcgtccggagcgcggcggctcgatcctcggcgagctctacgcccgcgaggtc
gccacgccgatcccggagcgcggcatctggccggcgatctacccgcagctcttggagcag
atccgcgcccaccgcgcgaccatcgtcttcgtcaacagccgcggcctctgcgagcgcctg
acccagcgcctcaacgagctggccggcgaagcgctggtccgcgcccaccacggcagcgtc
tcgcacgcccagcgcaccgagatcgaggaggcgctcaagcaaggccgactgcgcggcatc
gtcgcgaccagttcgctggagctcggcatcgacatgggcgccatcgagcaggtgatcctc
gtcgagtcgccgggctcggtggcgcgcgggctgcagcgcgtcgggcgcgccggccaccag
gtcggggccgtgagcagcgggcggatcttccccaagttccgcggcgacctgctcgagtgc
gccgtcatcgccgcgcggatgcgccgcggcgagatcgaggccctgcgcgtgccgcacagc
ccgctcgacgtcctcgcccagcagatcgtcgccgcctgcacggtcgccccgcggcgcgtc
gccgacctggccgcgctcgccgcccgcgcccatccctaccgcgaactcggccggccgatc
ctcgacggcctgatcgagatgctcgccggccactacccgagcgatgagttggccgcgctg
cgcccgctcctcgcctgggaccgcagcgccgacctggtgacggcccggcgcggcgcggcc
atgacggtgcggatgaacgccggcaccatccccgaccgcggccagtacgcggtgcgcctg
ggcaccgacggcccacggctcggcgagctcgacgaggagatggtcttcgagacccgcccc
ggcgagaacatcctcctcggcgcgacgacctggcacgtcgaggagatcacccgcgacgcc
gtcctcgtctcgcccgcgcccggcgagcccggcaagctgcctttctggcacggcgacggc
ccgggccggccgatcgagctcggccgggcgctcggcgccttcctgcgcgagctggccggc
cagggccgcgcccaggccgtcgactggctgatgcgcgaggcgccgctcgaccgctacgca
gccgagaacctggcgcgctacgtcttcgaccagctcgagcacacgggggccctgccgacc
gaccggcgcatcacgatcgagcgcttccgcgacgagctcggcgactggcgcatctgcctg
ctgacgccgttcggcgcgcgcgtccatgccccgctcgcgatggcgctgcagcatcgcctg
gcgagcgacggcggccacgaggtccaggtcatgtacaccgacgacggcatcgtgctgcgc
ttcgccgacgccgaggagctgccggcgctcgcagaactgctgcccgatccggacgagatc
gacgagctggtcacgacccagctcgccgagacggccctgttcgccggcctcttccgcgaa
aacgccgcccgcgccctgctgctgccgcgccgcggtccggcgcggcgcagccccctgtgg
gtgcagcgcctcaaggcccaggagctgctcgccgcggtgcgccgctaccccgcctttccg
atcgtcatcgagacctaccgccaggcgctggccgacgtcttcgacctggccgagctgaag
gagctgctgcgcgccgtgcgcagccgccgaatccgggtcgacgaggtcgagacgcgctcg
gcctcgcccttcgcccgctcgctcgtcttcgcctacgtcgccgcctacatctacgaacag
gacgcaccgctcgccgagcgtcgcgcccaggccctgacgctcgatcgcgggctcctcgcc
gagctgctcggccaggccgagctgcgcgagctgatcgacccgggcgtccttgccgagctc
gaggccgagctccagcacctggccgaggagcgccgggcgcgcgacgccgacgagctgcac
gacctactgcgtcgcctcggcgacctgagcaagcccgagatcgccgcccgcacgcgcggt
gacgggcgcacctggctggaacaactcttcgcgcaacagcgcgcagcggccgtgcgcatc
gccggcgaggcacgctcgatcgccgccgacgaggccgccctctaccgcgatgcgctcggc
gtcgtcccgccgcccgggctgccgcaggccttcctcgacccgccaccgcagccgctcgcg
cacctgctgcgccgcttcgcccgctgccatggccccttcgtcaccggcgagcccgcggcc
cgctacggactgccaccgggcgccgtcgagccggtgctgcgggcactggaggccgagggg
cggctggtacgcggggagctccgccccggcggctgcgagcccgaatggtgcgacgccgag
gtcctgcgccggctcaagcggcgcacgctggcgcggctgcgcaacgccgtcgcgccggtc
gacgcggcgacgctcgggcgcttcctgcccgactggcacggcctcgacgggaaacgcggc
ggcccggagcggctgctcgaggtcatcgcccagctcgaggggctggcgctgccctggtcg
acgctgcactcggtcatcctgccccggcgcgtcgccggcttcgcccccgaaatgcttgac
atgctcgccgccgccggcgagatcgtctggatcggccgcggaccgctcggggcccgcgac
gggcgtatcgccctctaccgtcgtgggcgggtcgcgcgcctgctcgtgccccctcctcca
ccggaagatctcgagccgctggcggtcgcgatcctcgcccggctcgccgagcgcggcgcg
agcttcctcgtcgagctcgaggaggccgcccgggcggccgcgcccggggccaccaccgcc
gagctggaggcggccctctgggacctggtctgggccgggcgaatcaccaacgacaccttc
gcgccgctgcgctacctcggccatgcacggccgcgcagccagcacggccgctggcggccg
ggccggtcgctggccggcggacgctggtcgctcgtcggcgggctcgtggcaacaccggtg
agcacaaccgagcgggccctcgcccaggccgagcagctactggagcgctacggcgtggtc
agccgcgaggcagccatcgccgaggacttgcccggcggcttcggcgccgtctaccgggta
ctcaaggagctggaggagaccgggcgggtacgccgcggctggttcatcgagggcctctcc
ggcgcccagttcgcgctgcccggcgcgctcgatcggctgcgcgcggcccgcccggcagag
gacgacctcaccgacggcgcgggcgagaccgcttgcatcctggcggcaatcgatccggcc
aatccctggggcgccctgctgccctggccgccgaccggtggcgccgacggccgaccccgc
cgagtcgccggcgcctggctcatcaccgtcggcggcctaccgagcatctacgtcgccccc
ggcgggcgacgcatccagaccttcccatcgccgggcgacgacgaccaggccctaagcagt
gcctgcgaggccctgcaccgactgccacgccgccgcacgctgatcgtcgagcagatcgac
ggcgtgccagcacgcgaatccccactcgccgagcgcctgcgcgcctgcggcttcgtcgac
gactaccggggtctggcggccgagatgggttactccaaggaagtgggatag

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