Thioflavicoccus mobilis: Thimo_1832
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Entry
Thimo_1832 CDS
T02397
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
tmb
Thioflavicoccus mobilis
Pathway
tmb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Thimo_1832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmb03400
]
Thimo_1832
DNA repair and recombination proteins [BR:
tmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Thimo_1832
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Thimo_1832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AGA90600
UniProt:
L0GYZ1
LinkDB
All DBs
Position
2027672..2028391
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AA seq
239 aa
AA seq
DB search
MSGQSAGHLQRCLLLHRRDFSNTSLLVEVFSATEGRFPAVAKGARRGRAPTAALLQPFQP
LWLGWSGRGEVRTLGKVEAAGAPLTLPGDALYCGFYLNELLMRLLARHDPQENLFAFYLA
ALKDLASGQVIDQVLRRFELQLLQVLGYGLVLDREADTGHPISAAGRYRYVPERGIVPAR
DAMPQETLSGTTLLQLAGEEPLGGKEIREARRLLRAALAPHLGQRPLASREFFRRARGS
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcagtcggctgggcacctccagcgttgcctgctcctgcaccgacgcgatttc
agcaataccagcctcctggtcgaggtcttctcggcaaccgaggggcgcttccccgccgtg
gcgaaaggggcccgacgtggacgcgcgccgaccgcggcccttctgcaaccgtttcagccc
ctttggctcggctggagcgggcgtggggaggtccgcaccctcggcaaggtcgaggccgcc
ggcgcacccctgaccctgcccggcgatgccctctactgtggcttctatctgaacgaactg
ctgatgcgactgctggcccgccacgatcctcaggaaaacctgttcgccttctatctcgct
gcgctcaaggatctcgccagcggtcaggtcatcgaccaggtcctgcggcgcttcgagctg
caattgctccaagtcctcggttacggtctcgtactcgatcgggaggccgacaccggccac
ccgatctccgcggccggacgctaccgctacgtcccggagcgcggcatcgtaccggcacgc
gatgcgatgccgcaggaaaccttgtccggtacgaccctgctgcagttggcaggtgaggag
ccgctgggagggaaagagatccgcgaggcgcggcgcttgctgcgcgcggcgctcgccccg
caccttgggcaacgccccctcgcgagtcgggagttcttccgtcgggcacgagggtcttag
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