KEGG   Thioflavicoccus mobilis: Thimo_1984
Entry
Thimo_1984        CDS       T02397                                 
Name
(GenBank) helicase, type I site-specific restriction-modification system restriction subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tmb  Thioflavicoccus mobilis
Brite
KEGG Orthology (KO) [BR:tmb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tmb02048]
    Thimo_1984
Enzymes [BR:tmb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Thimo_1984
Prokaryotic defense system [BR:tmb02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Thimo_1984
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N HSDR_N_2 AAA_34 Helicase_C AAA_11 AAA_30 AAA_16 PhoH AAA_19 SNF2-rel_dom nSTAND3 DUF87
Other DBs
NCBI-ProteinID: AGA90749
UniProt: L0GZK6
LinkDB
Position
2198144..2200630
AA seq 828 aa
MPPRARRLIGMDKRSLSERDICTKFITPALRHAGWDEMSQIREEVSFTKGRIIVRGKLVT
RGQAKRADYILYYRPNLPLALIEAKDNAHSVGDGMQQALDYAQTLNIPFVFSSNGDSFVF
HDRTGGSDPRETTLPLDAFPSPADLWARFRAWKGLDAEAESVVLQDYHDDGSGKTPRYYQ
VNAINAAIEAIAKGRRRVLLVMATGTGKTYTAFQIIWRLWKAGRSKRILFLADRNVLIDQ
TMVNDFRPFGGTMAKLSTNAKTIERGDGSTDDLTLALDKRRRIDTAYEVYLGLYQAITGP
EESQKLFREFSPGFFDLIVIDECHRGSAAEDSAWREILEYFSAATQIGLTATPKETQYVS
NIAYFGEPVFTYSLKQGIRDGFLAPYKVVKVHIDRDVEGYRPEKGQLDRVGEEVEDRLYN
IKDFDRTLVIDDRTRLVAQKVTQFLKESGDRYQKTILFCVDQEHAARLRQALTNENADLV
AENPRYVMRITGGDAEGQAQLGNFIDPEARWPVLVTTSRLLSTGVDAQTCRLIVLDREVG
SMTEFKQIVGRGTRVHEDTRKYYFTLIDFRGATSHFADPDFDGEPVQIYAPKDGQPIDPP
DAPPTDEDGLPLPESPGDDETIVDRPGVDQPDLPPPTGGPRRKVYVDGVGASIVAERVEY
LDEHGRLVTESLRDFTKRALRKRFASLDDFLRRWNAAERKQAILEELEAEGLPLDPIVAE
LGRDLDPFDLICHVAFDAKPLTRRERAEHVKKRDAFTKYGPKARAVLDALLAKYADEGVL
NLDDANVLRIAPFSGLGTPIELIRAFGGKPSFERAVHDLQSELYRDTA
NT seq 2487 nt   +upstreamnt  +downstreamnt
ttgccgccgcgggcgaggcgcctgatcggcatggacaagcgcagcctctccgagcgcgac
atctgcaccaagttcatcacgccggcactgcgccatgccggctgggacgagatgtcgcag
atccgcgaggaggtgagcttcaccaagggccggatcatcgtccgcggcaagctggtcacc
cgcggacaggccaagcgggccgactacatcctctactacaggcccaacctgccgctggcc
ctcatcgaggcgaaggacaacgcccatagcgtcggcgacggcatgcagcaagccctcgac
tacgcccagacactgaacatccccttcgtcttttcgtccaacggcgacagcttcgtcttc
cacgaccgcaccggcggcagcgatccgcgcgagacgacgctgccgctcgatgcctttccg
tcgcccgccgacctctgggcccggtttcgcgcctggaagggcctcgatgccgaggccgag
tccgtcgtccttcaggactaccacgacgacggcagcggcaagaccccgcgctactaccag
gtcaacgcgatcaacgccgcgatcgaggcgatcgccaaggggcggcggcgtgtgctgctc
gtcatggcgacgggcacgggcaagacctacaccgccttccagatcatctggcgcctgtgg
aaggccggccgatcgaagcgcatcctgttcctcgccgaccgcaacgtcctcatcgaccag
accatggtcaacgacttccgccccttcggcgggaccatggccaagctctcgaccaacgcc
aagaccatcgagcgaggcgacggcagcacggacgacctgaccctcgcgctcgacaagcgc
cgccgcatcgacaccgcctacgaagtctatctcggcctctatcaggccatcaccgggccg
gaggaatcgcagaagctgttccgcgagttctcgcccggtttcttcgacctcatcgtcatc
gacgaatgccatcgcggcagcgccgccgaggactcggcctggcgcgagatcctcgaatac
ttctccgccgccacccagatcggcctgaccgccacgccgaaggagacccaatacgtctcc
aacatcgcctatttcggtgagccggtgttcacctattccctcaagcaaggcatccgcgac
ggcttcctcgcgccctacaaggtcgtcaaggtccacatcgaccgggacgtcgaaggctac
cgccccgagaagggccagctcgaccgcgtcggcgaggaggtcgaggatcgcctctacaac
atcaaggacttcgaccggacgctggtcatcgacgaccgcacgcgactggtcgcgcagaag
gtcacgcagttcctgaaggagagcggcgaccgctaccagaagaccatcctgttctgcgtc
gaccaggaacatgccgcccgcctgcgccaggcgctgaccaacgagaacgccgacctcgtc
gccgagaacccgcgctacgtcatgcgcatcaccggcggcgacgccgagggccaggcgcag
ctcggcaacttcatcgacccggaggccaggtggcccgtgttggtcacgacatcccggctc
ctctcgaccggcgtggacgcccagacctgccgcctgatcgtcctcgaccgcgaggtcggc
tcgatgaccgagttcaagcagatcgtcggccgcggcacccgtgtgcacgaggacacccgc
aagtactacttcacgctcatcgacttccgcggcgcgaccagccacttcgccgacccggac
ttcgacggcgagccggtgcagatctacgcgccgaaggacggccagccgatcgatccgccc
gacgccccaccgaccgacgaggacggcctgccgctgcccgagtcacccggcgacgacgag
accatcgtcgaccgaccgggcgtcgaccagccggacctgccaccgccgaccggcgggccg
cgccggaaggtctacgtcgatggcgtcggcgccagcatcgtcgccgagcgggtcgaatac
ctcgacgagcacggccggctcgtcaccgagtccctgcgcgacttcaccaaacgcgcgctg
cgcaaacgcttcgccagcctcgatgatttcctgcggcgctggaacgccgccgagcgcaag
caggccatcctggaagaactggaggccgagggcctgccgctcgacccgatcgtcgcggag
ctgggccgcgacctcgaccccttcgacctgatctgccacgtcgccttcgacgccaagccg
ctgacccgccgcgagcgggccgagcacgtcaagaagcgcgacgccttcacgaaatatgga
ccgaaggcccgtgccgtcctcgatgctctgctcgccaagtacgccgacgagggcgtgctg
aacctcgacgacgccaacgtgctgcggatcgcgcccttctccggactcggcacgccgatc
gagctgatccgcgccttcggcggcaagcccagcttcgaacgggccgtccacgacctgcaa
tccgaactctatagggataccgcctga

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