Thioflavicoccus mobilis: Thimo_2317
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Entry
Thimo_2317 CDS
T02397
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
tmb
Thioflavicoccus mobilis
Pathway
tmb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Thimo_2317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmb03400
]
Thimo_2317
Enzymes [BR:
tmb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Thimo_2317
DNA repair and recombination proteins [BR:
tmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Thimo_2317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AGA91057
UniProt:
L0GYZ6
LinkDB
All DBs
Position
complement(2571297..2574554)
Genome browser
AA seq
1085 aa
AA seq
DB search
MLQVIRSNRVESLFDVLAHRLAAAPLASPLAPEIVVAPSPAMARWVNLQLARHHGVAANL
QYPLPSSFVWQLARERLAELPEEDPLAIEQLAWQVFGALPGLLEVPEFAPLRGYLADDGQ
ALKRWQLAGRIADLFDRYQLHRPERIRAWDAGEGADWQAVLWRRLVVDIEGAHRVAVIDR
LLAALAAPSREGQGDRLPERISLFAISSLPPLLIEVFQALAAHTAVDLYLHAPTEAFWAD
LVSQKVLARKRLEHPDEADLWEVGNPLLASWGRQGQALHDLLLSRDTPLVEVDAFTEPAT
DTLLGRLQHDIFRLRPIAAAGERQAVEPDDSLQVHVTHSPLRECQVLHDRLLAMLDADQN
LRPEDILVMIPEISAYAPYVEAVFDQDGERGRPFIPWNLSDISVADEHPLVEVFLGLLDL
PASRFGQSEVLSYLDVPELAGHFGLDGEAVAQIRDWLAQARLRWGLDAEHKARLGLPGAE
ENTWAQAERRLFAGYAMGDAMGEVDLFDGIAPIGGVEGTGAEVLGRFWRLFGALTEAAAR
LAVPRTAGQWQDCLGGLLVELFGERDDEDGRLQKVRDALGELAEQAAGLAEPLSPALVRR
WLAARLGAAGRRGRYFSGGVTFCGMRPMRSLPFAVICVLGLDDLAFPRRDRPVELDVAPE
GWRPGDPRKGDEDRYLFLETLLCARRRLYLSHVGRDIRRNTERQPSVLLRELLDYIDQQY
RPADGADDRPLSARLTTVHPLQPFSPRSYVAGTGSYDDYWCEVARAIQAPNLPDTVSTNW
CEHRLSEAPERMREVTLEQLERFLRHPIRYFVASRLQIHMAEEAPAEDAEPFAFDALERY
LLKERLVADRLRGRTPSRQRLGAEGALPHGAFADLVLGEQDEQVVPLVERLAPYRERRPE
PVAIDFAFDADDGPRRLTGQVADIYPGLGLLRWRPGTMRGADLLGLWLAHLAWCAAGGPG
ERRSALHTLGEGVAIEAALPPAEARAALARYLDWYWEGLHRPLLALPRASWAFALARHRG
GRGDPLNAARSAWLGSDYQGIPGDRHDPHVALVLRGVAGEPLDHPEFQRLAEAFYDEPLA
HGAPP
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaagtcatccgctcgaaccgcgtcgaatccctgttcgatgtcctggcgcaccgt
ctcgccgcggcgccgctggcctcgccgctcgcgcccgagatcgtcgtcgcgccgagcccg
gcgatggcgcgctgggtcaatctccagctcgcccgccatcacggcgtggcggccaacctc
cagtacccgctgccgtcgtcgttcgtctggcagctcgcgcgcgagcgcctcgccgagctg
cccgaggaggacccgctcgcgatcgagcagcttgcgtggcaggtcttcggcgcgctgccg
gggctcttggaggtccccgaattcgcaccgctgcgcggctatctcgccgatgatgggcag
gccctcaagcgctggcagctcgccgggcgcatcgccgacctcttcgaccgctatcagctc
caccgtcccgagcggatccgcgcctgggacgcgggcgagggcgcggactggcaggccgtc
ctctggcggcggctcgtcgtcgacatcgaaggtgcccatcgggtcgcggtcatcgaccgg
ctcctcgcggcgctcgccgcgccctccagggaagggcagggcgaccggctgcccgagcgc
atcagcctgttcgcgatctccagcctgccgccgctcctgatcgaggtcttccaggccctc
gccgcgcacacggccgtcgatctctatctgcacgccccgaccgaggccttctgggccgac
ctggtctcgcagaaggtcctggcccgcaagcgcctggagcaccctgacgaggccgacctt
tgggaggtcggcaacccattgctggcctcctggggccgccaggggcaggccctgcacgac
ctgctgctgagccgcgacacgccgctcgtcgaggtcgacgccttcaccgagccggccacc
gacacgctgctcgggcgtctccagcacgacatcttcaggctgcgcccgattgccgccgct
ggcgagcgccaggccgtcgagcccgacgactcgctccaggtccatgtcacccatagtccg
cttcgcgagtgccaggtcctacacgaccgactgctcgcgatgctcgatgccgaccagaac
ctccgccccgaggacatcctggtgatgatccccgagatcagcgcctacgcgccctacgtc
gaggccgtcttcgaccaggacggcgagcgcggccggcccttcatcccgtggaacctgtcc
gacatctcggtcgccgacgagcacccgctcgtcgaggtcttcctcgggcttcttgacctg
ccggcgagccgcttcggccagtccgaagtcctgtcctatcttgacgtccccgagctcgcc
gggcacttcggcctcgacggcgaggcggtcgcccaaatccgcgactggctcgcccaggcc
cggctgcgctgggggctcgatgccgagcacaaggcgcgcctcgggctgccgggggccgag
gagaacacctgggcccaggccgagcggcgcctgttcgccggctatgcgatgggcgatgcc
atgggcgaggtcgacctcttcgacggcatcgccccgatcggcggcgtcgaggggaccggc
gccgaggtcctcgggcgcttctggcgcctgttcggcgccctgaccgaggcggccgcgcgc
ctcgccgtgccgcgcacggccgggcagtggcaggactgcctcggcggcctgctcgtcgag
ctcttcggcgagcgcgacgacgaggacggtcgcctgcagaaggtccgcgacgccctaggc
gaactcgccgagcaggccgccgggcttgccgagccgctctccccggcgctcgtgcgccgc
tggctcgccgcgcgcctgggcgccgccgggcggcgtgggcgttacttcagcggcggcgtg
accttctgcggcatgcgcccgatgcgcagcctcccgttcgcggtgatctgcgtgctcggc
ctcgacgacctggccttcccgcgccgcgaccgcccggtcgagctcgacgtcgcccccgag
ggctggcgccccggcgacccgcgcaagggcgacgaggaccgctacctgttcctcgagacc
ctcctctgcgcccgccgacgcctgtatctcagccacgtcgggcgcgacatccgccgcaac
accgagcgccagccctcggtcctcctgcgcgagctgctcgactacatcgaccagcagtat
cgtcccgccgacggcgccgacgaccgcccgctcagcgcgcgcctgacgacggtccacccg
ttgcagccgttcagcccgcgcagctacgtcgccggcaccggcagctacgacgactactgg
tgcgaggtcgcccgcgccatccaggcacccaacctgccggacacggtctcgactaactgg
tgcgagcaccgcctgtccgaggccccggagcggatgcgcgaggtcacgctggagcagctc
gagcgcttcctgcgccacccgatccgctacttcgtcgccagccgcctgcaaatccatatg
gccgaggaggccccggccgaggacgccgagccgttcgccttcgatgccctcgaacgctac
ctgctgaaggagcggctcgtcgccgaccggctgcgtgggcgcacgccgtcgcgccagcgg
ctcggcgccgagggggcgctgccgcacggggccttcgccgacctggtgctgggcgagcag
gacgagcaggtcgtcccgctggtcgagcgcctggcgccctaccgcgagcggcgtcccgag
ccggtcgcgatcgacttcgccttcgacgccgatgacggcccgcgccgcctgaccggccag
gtcgccgacatctatcccggcctcggcctgctgcgctggcggccgggcacgatgcgcggt
gccgacctcctcggcctgtggctcgcccacctcgcctggtgtgcggccggcggccccggt
gagcggcgcagcgccctgcacacgctcggcgagggcgtcgccatcgaggccgcgctgccg
ccggccgaggcccgggccgcgctcgcccggtacctcgactggtactgggagggcctgcac
cgcccgctgctcgcgctgccgcgggcgagctgggccttcgcgctggcccgccaccgcggc
gggcgtggcgatccgctcaacgccgcgcgcagcgcctggctcggcagcgactaccagggt
atcccgggcgaccggcacgacccccatgtcgcgctggtgctgcgcggcgtcgccggcgag
ccgctcgaccaccccgagttccagcggctcgccgaggccttctacgacgagccgctcgcc
cacggagcgccgccgtga
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