Thioflavicoccus mobilis: Thimo_2397
Help
Entry
Thimo_2397 CDS
T02397
Name
(GenBank) primosomal protein N''
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tmb
Thioflavicoccus mobilis
Pathway
tmb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Thimo_2397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmb03400
]
Thimo_2397
Enzymes [BR:
tmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Thimo_2397
DNA repair and recombination proteins [BR:
tmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Thimo_2397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
Zn_ribbon_PriA
Helicase_C
ResIII
WHD_PriA
HypA
Trm112p
SH3_16
Zn_Ribbon_TF
Zn_ribbon_6
HTH_27
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
AGA91133
UniProt:
L0GWK0
LinkDB
All DBs
Position
complement(2657083..2659431)
Genome browser
AA seq
782 aa
AA seq
DB search
MCGYGVDDRSHNTQLLGVRKRQLCLLREAGEQPVDSLGAGVSGAPSILRVAVPAPVPEPF
DYLPPSEPGTPPPRPGQRVLVPFGRGRRVGLIVALGSTTKVAPQRLKPVIEILDERPLLA
EADLAFLRWAADYYQYPLGEALFSALPGRLRRSGPDLGSGADPGERGWCLTGAGAQADLD
DLKRAPRQAQVLSHLRALGGKAAVADLARVLGQCAAALRALERRGWVESCLIEDAVPAPA
PVAGPILNDDQQTAFDQVSRAFGTFVPFLLEGVTASGKTEVYIRLLEAVIAAGRQALVLV
PEIGLTPQLERRFAARLGGTMVILHSGLAEGERERAWRRAAAGEVDLLLGTRSAVFVPLP
RLGLILIDEEHDLSFKQQEGFRYSGRDLAVRRAQQAGCPVVLGSATPSLETLANARAGRY
RWLRLHRRAGGAAPPAMTLIDIRAQPLEAGLSPPLLQLAEEQLAAGNQVLLFLNRRGFAP
VLTCHDCGWVGECPRCDARLTLHRASGELRCHHCGLIRPAPGRCPSCGGPDLRPLGQGTE
RVEEVLARRFPGLPLARVDRDSTRRKGELTRLLSAARRGDYRLLLGTQMLTKGHHFPGVT
LVGVVDADAGLYGADYRAPERMAQLLVQVTGRAGRAERSGRVVVQTRHPEHPLLDSLLRE
GYPAFAEAALTERRVAALPPFSHQALLRAEARAADEALAFLRAAASVADVGGASGVGDVV
LWGPAPAPMERRAGRWRAQLLVQSPHRQALRRFLVDWLPRVRQAEGAGRVRWSIDVDPQE
MG
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctacggcgtcgatgaccgcagccataatacacaactacttggggtgcgcaag
cgacaattgtgcctcctgcgagaggcgggtgagcagccagtcgactccctgggggcaggc
gtgagcggagcgccgtcgatcctgcgggtggccgtcccggcccccgtgccggagccgttc
gactacctgccgccgagcgagccaggtacgccgccgccgcgccctggccagcgggtcctc
gtcccctttgggcgcggccggcgtgtcggcttgatcgtcgcgctgggctcgaccacgaag
gtggcaccgcagcgactcaaacccgtcatcgagatcctcgatgagcgcccgctactcgcc
gaggcggatctggcctttctgcgttgggccgcggattactaccagtacccgctcggcgag
gccttgttcagcgcgctgccggggcggctacgccgatcaggaccggatctggggtccggt
gcggacccgggcgagcggggctggtgcctgacgggggcaggtgcgcaagccgacctcgac
gacctcaagcgagccccacgtcaggcgcaggtactgagccatctgcgggcgctcggcgga
aaggctgcggttgcggatctcgcccgcgtcctcggtcagtgtgccgctgcgttgcgtgcg
ttggagcgccgcggctgggtcgagtcgtgcctgatcgaggacgcggtgccggcaccggcg
cccgtcgccgggccgatcctcaacgatgaccagcagacggccttcgatcaggtaagccgc
gccttcggcaccttcgtgccctttctgctcgagggggtgaccgcgagtggcaagaccgag
gtctacatccgcctgctcgaggcggtcatcgccgccggcagacaggccttggtgctggtc
ccggagatcgggctcacgccgcagctcgagcggcgcttcgccgcgcgtctgggcgggacg
atggtgatcctgcactcgggcctcgccgagggcgagcgcgagcgggcctggcggcgtgcc
gcggccggcgaggtcgacctcctgctcggcacgcgttcggcggtcttcgtgccgttgccg
cgtcttggtctgatcctcatcgacgaggagcatgatctgtcgttcaagcagcaggaaggg
tttcgctactccgggcgcgatctcgccgtgcgtcgcgcccaacaggccggctgcccggtg
gtgctcggctcggcgaccccgtcgctcgagaccctggccaatgcccgcgccgggcgctac
cgctggctgcggctgcatcgacgcgccggcggtgcggccccgccggccatgaccttgatc
gacatccgcgcccagccgctcgaggccggcctctcgccgccgttgctgcagcttgccgag
gagcagctcgccgccggcaaccaggtgctgctgttcctcaatcgccgcggcttcgcgccc
gtgctgacgtgccacgactgcggttgggtcggcgagtgcccgcgctgcgatgcgcgcttg
acgctgcaccgggcgagcggcgagctgcgctgccaccactgcggtctgatccgtcctgcg
ccggggcgctgcccgagctgcggcggcccggatctgcgcccgctcggccaagggaccgag
cgcgtcgaggaggtcctggcgcggcgtttccccggcctgcccctggcccgcgtcgatcgc
gacagcacccggcgcaagggcgagttgacgcggctcttgagcgccgcgcgccggggcgat
taccggctgctgctcggtacccagatgctcaccaagggccaccacttccccggcgtcacg
ctggtgggcgtcgtggatgccgatgccggcctctacggcgccgactaccgcgcgcccgaa
cggatggcccagttgttggttcaggtgaccggccgtgccgggcgagccgagcggtccggg
cgggtcgtcgtgcagacgcgccaccccgagcatccgctgctcgactccctgctgcgcgag
ggctatccggccttcgccgaggcggccctaaccgagcggcgcgtcgcggccctgccgccg
ttcagccaccaggccctgctgcgggccgaggcccgtgccgccgatgaggcgctggccttc
ctgcgggcggcggcgtccgtcgccgatgttggcggcgcgtcgggcgtcggcgatgtggtc
ctctggggcccggccccggcgccgatggagcgtcgcgccgggcgctggcgcgcccagctg
ctcgtgcagtcgcctcaccggcaggccctgcgccggttcctcgtcgactggttgccccgg
gtgcgccaggccgagggggcggggcgggtgcgatggtcgatcgacgtcgatccgcaggag
atgggctag
DBGET
integrated database retrieval system
